Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2538945 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2538945, End: 2540588, Length: 1644

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:3627588:3655586365558636572441659Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein0809
NC_011283:4170369:4205974420597442076501677Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein0799
NC_016845:1285435:1308111130811113097871677Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein0796
NC_004556:1178897:1196402119640211979521551Xylella fastidiosa Temecula1, complete genomehypothetical protein3e-87323
NC_010577:1188438:1205942120594212074921551Xylella fastidiosa M23, complete genomephage uncharacterized protein3e-87323
NC_009255:1344000:1361275136127513628281554Burkholderia vietnamiensis G4 chromosome 2, complete sequencephage protein1e-83311
NC_011001:1145508:1160500116050011620471548Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein5e-83308
NC_017033:1557981:1578350157835015799061557Frateuria aurantia DSM 6220 chromosome, complete genomeputative phage protein large terminase9e-77288
NC_007794:3218729:3221762322176232232161455Novosphingobium aromaticivorans DSM 12444, complete genomePhage uncharacterized protein-like6e-33142
NC_009778:2993218:2999961299996130014241464Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-30133
NC_009802:1917917:1930335193033519317891455Campylobacter concisus 13826, complete genomechaperone and heat shock protein 709e-29128
NC_014722:846084:8647218647218661091389Burkholderia rhizoxinica HKI 454, complete genomeLarge terminase subunit4e-28126
NC_010981:1111417:1111417111141711128141398Wolbachia pipientis, complete genomephage uncharacterized protein1e-24114
NC_011894:3671162:3671162367116236726341473Methylobacterium nodulans ORS 2060, complete genomephage uncharacterized protein2e-23111
NC_012751:1538500:1545210154521015466491440Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative phage terminase-like protein4e-22106
NC_007799:647514:6751856751856765941410Ehrlichia chaffeensis str. Arkansas, complete genomephage uncharacterized protein3e-21103
NC_012988:769981:8452138452138466701458Methylobacterium extorquens DM4, complete genomephage protein6e-1789.4
NC_010172:798923:8651618651618666181458Methylobacterium extorquens PA1, complete genomephage uncharacterized protein9e-1789
NC_014217:4550544:4557655455765545590911437Starkeya novella DSM 506 chromosome, complete genomephage uncharacterized protein1e-1688.2
NC_015593:1587684:1592005159200515934711467Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completephage protein2e-1584.3
NC_017372:1212000:1237841123784112393971557Helicobacter pylori India7 chromosome, complete genomephage-related CUP0950-like protein3e-1377
NC_017208:694500:7122077122077136221416Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeLarge terminase subunit5e-1273.2
NC_017358:182854:1939511939511955101560Helicobacter pylori Cuz20 chromosome, complete genomephage-related CUP0950-like protein2e-1171.2
NC_008229:1397361:1417781141778114193341554Helicobacter acinonychis str. Sheeba, complete genomephage-related CUP0950-like protein1e-0965.5
NC_010682:2422500:2424802242480224262771476Ralstonia pickettii 12J chromosome 1, complete sequencephage uncharacterized protein, putative7e-0962.8