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Query: NC_009708:1694685:1708769 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1708769, End: 1709962, Length: 1194

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005810:2613456:2617730261773026189651236Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0787
NC_010465:1724000:1740149174014917412281080Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein0647
NC_003143:2849377:2853651285365128548411191Yersinia pestis CO92, complete genomehypothetical protein0786
NC_008149:2411161:2415465241546524166551191Yersinia pestis Nepal516, complete genomehypothetical protein0786
NC_010159:1861465:1865732186573218669221191Yersinia pestis Angola, complete genomehypothetical protein0786
NC_017154:3139614:3155116315511631563061191Yersinia pestis D106004 chromosome, complete genomehypothetical protein0786
NC_017160:2740870:2754739275473927559291191Yersinia pestis D182038 chromosome, complete genomehypothetical protein0786
NC_017168:2892000:2907595290759529087851191Yersinia pestis A1122 chromosome, complete genomehypothetical protein0786
NC_017265:1521276:1538388153838815395781191Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0786
NC_004088:1801819:1817276181727618185111236Yersinia pestis KIM, complete genomehypothetical protein0787
NC_010634:2960000:2962933296293329642011269Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein5e-133474
NC_006155:3040769:3045035304503530463031269Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-133474
NC_008800:1497746:1512494151249415138341341Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein9e-31134