Pre_GI: BLASTP Hits

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Query: NC_009708:1694685:1702804 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1702804, End: 1703349, Length: 546

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:1724000:173418617341861734731546Yersinia pseudotuberculosis YPIII, complete genomeNADH dehydrogenase (quinone)3e-71267
NC_005061:524704:537782537782538333552Candidatus Blochmannia floridanus, complete genomeNADH dehydrogenase I chain J6e-2096.7
NC_004061:166375:174365174365174856492Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeNADH dehydrogenase I chain J2e-1581.6
NC_008149:2411161:242207324220732422618546Yersinia pestis Nepal516, complete genomeNADH dehydrogenase I chain J3e-71267
NC_017253:155170:173702173702174214513Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I chain J1e-24112
NC_002528:148274:173672173672174184513Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeNADH dehydrogenase I chain J1e-24112
NC_014228:2812000:282157628215762822103528Xenorhabdus nematophila ATCC 19061, complete genomeNADH dehydrogenase I chain J1e-35148
NC_005966:715591:723502723502724023522Acinetobacter sp. ADP1, complete genomeNADH dehydrogenase I chain J7e-1993.2
NC_009085:893601:902298902298902690393Acinetobacter baumannii ATCC 17978, complete genomeNADH dehydrogenase I chain J7e-0753.5
NC_017255:156195:173702173702174214513Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-24112
NC_011834:156197:173705173705174217513Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-24112
NC_017256:144854:173765173765174274510Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,NADH dehydrogenase I subunit J6e-25113
NC_017252:155166:173698173698174210513Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-24112
NC_017259:148346:165285165285165794510Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,NADH dehydrogenase I subunit J1e-1272.4
NC_017171:825994:834668834668835189522Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeNADH dehydrogenase I subunit J1e-1789.7
NC_016603:23756:324133241332931519Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeNADH dehydrogenase I subunit J3e-1788.2
NC_017254:156215:173725173725174237513Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-24112
NC_011833:147426:173690173690174202513Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,NADH dehydrogenase I subunit J1e-24112
NC_017154:3139614:314915331491533149698546Yersinia pestis D106004 chromosome, complete genomeNADH dehydrogenase subunit J3e-71267
NC_017160:2740870:274877627487762749321546Yersinia pestis D182038 chromosome, complete genomeNADH dehydrogenase subunit J3e-71267
NC_006155:3040769:305172430517243052269546Yersinia pseudotuberculosis IP 32953, complete genomeNADH dehydrogenase subunit J3e-71267
NC_012759:2261416:227916922791692279723555Escherichia coli BW2952 chromosome, complete genomeNADH dehydrogenase subunit J6e-53206
NC_003143:2849377:286025928602592860804546Yersinia pestis CO92, complete genomeNADH dehydrogenase subunit J3e-71267
NC_015224:3191000:319860231986023199147546Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,NADH dehydrogenase subunit J1e-67254
NC_004347:1038253:105053310505331051084552Shewanella oneidensis MR-1, complete genomeNADH dehydrogenase subunit J1e-34145
NC_005810:2613456:262433826243382624883546Yersinia pestis biovar Microtus str. 91001, complete genomeNADH dehydrogenase subunit J3e-71267
NC_004088:1801819:181135818113581811903546Yersinia pestis KIM, complete genomeNADH dehydrogenase subunit J3e-71267
NC_008800:1497746:150668615066861507231546Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,NADH dehydrogenase subunit J5e-68256
NC_000913:2373984:239336423933642393918555Escherichia coli K12, complete genomeNADH dehydrogenase subunit J6e-53206
NC_010554:1871000:187884918788491879382534Proteus mirabilis HI4320, complete genomeNADH-quinone oxidoreductase chain J6e-43173
NC_013939:1995546:200585020058502006350501Deferribacter desulfuricans SSM1, complete genomeNADH-quinone oxidoreductase subunit J2e-0755.1
NC_020075:590481:599654599654600205552Candidatus Blochmannia chromaiodes str. 640, complete genomeNADH-quinone oxidoreductase subunit J6e-23107
NC_011595:3015895:302788830278883028406519Acinetobacter baumannii AB307-0294, complete genomeNADH-quinone oxidoreductase subunit J4e-1787.4
NC_010159:1861465:187234018723401872885546Yersinia pestis Angola, complete genomeNADH-quinone oxidoreductase, J subunit3e-71267
NC_010634:2960000:296962229696222970167546Yersinia pseudotuberculosis PB1/+, complete genomeNADH-ubiquinone/plastoquinone oxidoreductase chain 63e-71267
NC_018419:862500:871236871236871799564Secondary endosymbiont of Ctenarytaina eucalypti chromosome,NADH:ubiquinone oxidoreductase subunit 6 (chain J)5e-38156
NC_010611:797351:806025806025806546522Acinetobacter baumannii ACICU, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-1789.7
NC_014259:3369000:337800133780013378522522Acinetobacter sp. DR1 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)1e-1789.7
NC_017387:832000:839996839996840487492Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit 6 (chain J)8e-1579.7
NC_017168:2892000:290163229016322902177546Yersinia pestis A1122 chromosome, complete genomeNADH:ubiquinone oxidoreductase subunit J3e-71267
AC_000091:2379670:240001224000122400566555Escherichia coli W3110 DNA, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J6e-53206
NC_010473:2465844:248512924851292485683555Escherichia coli str. K-12 substr. DH10B, complete genomeNADH:ubiquinone oxidoreductase, membrane subunit J6e-53206
NC_017265:1521276:153242515324251532970546Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,NADH:ubiquinone oxidoreductase, membrane subunit J3e-71267
NC_017162:827567:836757836757837248492Acinetobacter baumannii 1656-2 chromosome, complete genomenuoJ8e-1579.7
NC_007204:696972:705580705580706299720Psychrobacter arcticus 273-4, complete genomeprobable NADH dehydrogenase I, J subunit1e-1789.4