Pre_GI: BLASTP Hits

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Query: NC_009708:1522281:1531986 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1531986, End: 1533446, Length: 1461

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3212796:3218873321887332203331461Yersinia pseudotuberculosis IP 32953, complete genomeputative sodium:solute symporter (SSS) family protein0966
NC_008149:1556581:1568822156882215702821461Yersinia pestis Nepal516, complete genomepermease0965
NC_008150:2451872:2459324245932424607841461Yersinia pestis Antiqua, complete genomeputative permease0965
NC_005810:2905362:2912814291281429142741461Yersinia pestis biovar Microtus str. 91001, complete genomeputative permease0965
NC_010159:2878499:2884576288457628860361461Yersinia pestis Angola, complete genometransporter, solute:sodium symporter (SSS) family0965
NC_003143:3346834:3354286335428633557461461Yersinia pestis CO92, complete genomeputative permease0965
NC_004088:1622941:1638899163889916403591461Yersinia pestis KIM, complete genomepermease0965
NC_009381:2373847:2379924237992423813841461Yersinia pestis Pestoides F chromosome, complete genomepermease0965
NC_014029:3401238:3408690340869034101501461Yersinia pestis Z176003 chromosome, complete genomeputative permease0965
NC_017154:3344273:3351725335172533531851461Yersinia pestis D106004 chromosome, complete genomeputative permease0965
NC_017160:3326199:3333651333365133351111461Yersinia pestis D182038 chromosome, complete genomeputative permease0965
NC_017168:2394079:2406320240632024077801461Yersinia pestis A1122 chromosome, complete genomeputative permease0965
NC_017265:1346685:1358060135806013595201461Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative permease0965
NC_010634:3129174:3136626313662631380861461Yersinia pseudotuberculosis PB1/+, complete genomeNa+/solute symporter0964
NC_010465:1550617:1566589156658915680491461Yersinia pseudotuberculosis YPIII, complete genomeNa+/solute symporter0962
NC_007952:1934249:1940023194002319414951473Burkholderia xenovorans LB400 chromosome 2, complete sequenceNa+/monocarboxylate symporter, SSS family4e-125448
NC_010623:72500:1002351002351017071473Burkholderia phymatum STM815 chromosome 2, complete sequenceNa+/solute symporter2e-93343
NC_014532:2268078:2289051228905122905681518Halomonas elongata DSM 2581, complete genomeK03307 solute:Na+ symporter, SSS family3e-31136
NC_007348:2558500:2575474257547425768561383Ralstonia eutropha JMP134 chromosome 2, complete sequenceNa+/solute symporter2e-29130
NC_016070:719791:7286717286717301371467Thermoproteus tenax Kra 1, complete genomeNa+/proline symporter2e-21103
NC_012588:211633:2317032317032332201518Sulfolobus islandicus M.14.25 chromosome, complete genomeNa+/solute symporter3e-21103
NC_017093:1411532:1418707141870714203561650Actinoplanes missouriensis 431, complete genomeputative sodium:solute symporter8e-21102
NC_014318:10070730:1009739810097398100990531656Amycolatopsis mediterranei U32 chromosome, complete genomesolute:Na+ symporter, SSS family2e-20100
NC_016027:1647110:1686221168622116876091389Gluconacetobacter xylinus NBRC 3288, complete genomeNa+/solute symporter9e-1892
NC_016109:5455060:5455060545506054566671608Kitasatospora setae KM-6054, complete genomeputative sodium/solute symporter2e-1790.5
NC_012522:3867167:3886341388634138878251485Rhodococcus opacus B4, complete genomeputative SSS family transporter5e-1789.4
NC_008260:2442000:2461493246149324649603468Alcanivorax borkumensis SK2, complete genomeNa-solute symporter/sensory box histidinekinase, putative3e-1273.9
NC_013939:1688400:1701781170178117049903210Deferribacter desulfuricans SSM1, complete genomeserine phosphatase3e-1067
NC_014330:697429:7031527031527047021551Brachyspira pilosicoli 95/1000 chromosome, complete genomesodium/pantothenate symporter1e-0861.2
NC_019908:2496149:2513904251390425154541551Brachyspira pilosicoli P43/6/78 chromosome, complete genomesodium/pantothenate symporter1e-0861.2
NC_011149:1077589:1081970108197010834811512Salmonella enterica subsp. enterica serovar Agona str. SL483,sodium/proline symporter5e-0756.2
NC_006905:1186895:1191279119127911927871509Salmonella enterica subsp. enterica serovar Choleraesuis strSSS family, major sodium/proline symporter7e-0755.8
NC_011147:1763681:1780018178001817815261509Salmonella enterica subsp. enterica serovar Paratyphi A strsodium/proline symporter7e-0755.8
NC_006511:1770000:1784835178483517863431509Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsodium/proline symporter (proline permease)7e-0755.8
NC_011080:1209935:1214319121431912158271509Salmonella enterica subsp. enterica serovar Newport str. SL254,sodium/proline symporter9e-0755.5
NC_003197:1207597:1211980121198012134881509Salmonella typhimurium LT2, complete genomemajor sodium/proline symporter9e-0755.5
NC_011083:1216500:1216709121670912182171509Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,sodium/proline symporter9e-0755.5
NC_016857:1163919:1168300116830011698111512Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74major sodium/proline symporter9e-0755.5
NC_004631:1842050:1857234185723418587421509Salmonella enterica subsp. enterica serovar Typhi Ty2, completesodium/proline symporter9e-0755.5
NC_003198:1117687:1122071112207111235791509Salmonella enterica subsp. enterica serovar Typhi str. CT18,sodium/proline symporter (proline permease)9e-0755.5
NC_011094:1166271:1170655117065511721631509Salmonella enterica subsp. enterica serovar Schwarzengrund strsodium/proline symporter9e-0755.5
NC_011205:1186097:1190480119048011919881509Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853sodium/proline symporter9e-0755.5
NC_011274:1094379:1098763109876311002711509Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sodium/proline symporter9e-0755.5
NC_011294:1085447:1089849108984910913571509Salmonella enterica subsp. enterica serovar Enteritidis strsodium/proline symporter9e-0755.5
NC_016810:1163919:1168303116830311698111509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter (proline permease)9e-0755.5
NC_016856:1165941:1170325117032511718331509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smajor sodium/proline symporter9e-0755.5
NC_016860:1205282:1209666120966612111741509Salmonella enterica subsp. enterica serovar Typhimurium strsodium/proline symporter9e-0755.5
NC_016863:1165232:1169616116961611711241509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1major sodium/proline symporter9e-0755.5
NC_017046:1164176:1168560116856011700681509Salmonella enterica subsp. enterica serovar Typhimurium str. 798sodium/proline symporter (proline permease)9e-0755.5
NC_012973:49208:5035350353518431491Helicobacter pylori B38 chromosome, complete genomeSymporter, SSS family (Proline Permease); membrane protein2e-0654.7
NC_016148:1877711:1908140190814019098581719Thermovirga lienii DSM 17291 chromosome, complete genomeNa+/solute symporter2e-0654.3
NC_016832:1838220:1854084185408418555741491Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Sodium/proline symporter2e-0654.3
NC_010102:1979742:1994562199456219960521491Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0654.3
NC_015320:1342105:1360580136058013619561377Archaeoglobus veneficus SNP6 chromosome, complete genomeNa+/solute symporter4e-0653.5
NC_020211:3151458:3169357316935731708411485Serratia marcescens WW4, complete genomeproline:sodium symporter6e-0652.8
NC_013716:1178383:1178383117838311798911509Citrobacter rodentium ICC168, complete genomesodium/proline symporter (proline permease)8e-0652.4