Pre_GI: BLASTP Hits

Some Help

Query: NC_009708:1403434:1413200 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1413200, End: 1414048, Length: 849

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:166900:168371168371169249879Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-111402
NC_006155:172313:173784173784174662879Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-111402
NC_020064:1501441:150819215081921509052861Serratia marcescens FGI94, complete genomehypothetical protein1e-96353
NC_017033:2758582:276569327656932766538846Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein2e-84311
NC_017033:1672313:168000916800091680857849Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein3e-75281
NC_017033:2081206:208638120863812087217837Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein3e-74278
NC_009708:2788855:2813918281391828150331116Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-68258
NC_012214:1650523:166488416648841665807924Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein8e-59227
NC_010577:151926:156672156672157487816Xylella fastidiosa M23, complete genomehypothetical protein7e-56217
NC_004556:151593:156746156746157633888Xylella fastidiosa Temecula1, complete genomehypothetical protein1e-54213
NC_013956:4326388:433553243355324336347816Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-50198
NC_016816:127802:138422138422139237816Pantoea ananatis LMG 5342, complete genomehypothetical protein4e-50198
NC_010067:191190:193516193516194115600Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-36151
NC_010067:2488141:2514733251473325166971965Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-29129
NC_009778:259241:2659482659482676661719Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-22107
NC_013282:3719500:3725443372544337274612019Cronobacter turicensis, complete genomehypothetical protein1e-22107
NC_020260:263528:2706322706322719571326Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-22106
NC_011185:37922:3901239012412432232Vibrio fischeri MJ11 plasmid pMJ100, complete sequencehypothetical protein3e-2099.4
NC_011185:37922:415674156742448882Vibrio fischeri MJ11 plasmid pMJ100, complete sequencehypothetical protein1e-1583.6
NC_015385:288000:2993862993863005311146Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein5e-0652