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Query: NC_009708:1403434:1404439 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1404439, End: 1404663, Length: 225

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:3250810:326741232674123267636225Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein8e-38155
NC_006155:3333303:334995233499523350176225Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein8e-38155
NC_010465:1427170:143003114300311430255225Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF14078e-38155
NC_004088:1510467:151147215114721511696225Yersinia pestis KIM, complete genomehypothetical protein1e-37154
NC_003143:3191246:320836332083633208587225Yersinia pestis CO92, complete genomehypothetical protein1e-37154
NC_008149:1440371:144137614413761441600225Yersinia pestis Nepal516, complete genomehypothetical protein1e-37154
NC_010159:409500:427060427060427284225Yersinia pestis Angola, complete genomehypothetical protein1e-37154
NC_005810:3021913:303934430393443039568225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-37154
NC_009381:2491427:250858225085822508806225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-37154
NC_017168:2535732:255282525528252553049225Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-37154
NC_017265:2940539:295886029588602959084225Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-37154
NC_009800:2651730:267323926732392673454216Escherichia coli HS, complete genomehypothetical protein1e-1788.6
NC_013282:3216226:323842232384223238643222Cronobacter turicensis, complete genomeUncharacterized protein yfgJ2e-1684.3
NC_020063:1194000:119560611956061195824219Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF1407)3e-1684
NC_014618:1295322:131197913119791312194216Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein7e-1682.4
NC_012917:3378759:339289433928943393118225Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-1477.4
NC_016602:2854107:288020828802082880432225Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein6e-0959.3