Pre_GI: BLASTP Hits

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Query: NC_009708:1403434:1403434 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1403434, End: 1404390, Length: 957

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2940539:295913329591332960089957Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative AEC family malate permease4e-146517
NC_010465:1427170:142902614290261429982957Yersinia pseudotuberculosis YPIII, complete genomeAuxin Efflux Carrier4e-146517
NC_008149:1440371:144037114403711441327957Yersinia pestis Nepal516, complete genomemembrane protein4e-146517
NC_008150:2574794:259220925922092593165957Yersinia pestis Antiqua, complete genomehypothetical protein4e-146517
NC_005810:3021913:303961730396173040573957Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-146517
NC_003143:3191246:320863632086363209592957Yersinia pestis CO92, complete genomehypothetical protein4e-146517
NC_004088:1510467:151046715104671511423957Yersinia pestis KIM, complete genomehypothetical protein4e-146517
NC_009381:2491427:250885525088552509811957Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-146517
NC_014029:3171627:317162731716273172583957Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-146517
NC_017154:2876545:289384828938482894804957Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-146517
NC_017160:3094768:309660230966023097558957Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-146517
NC_017168:2535732:255309825530982554054957Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-146517
NC_010159:409500:427333427333428289957Yersinia pestis Angola, complete genometransporter, auxin efflux carrier family2e-145515
NC_006155:3333303:335022533502253351181957Yersinia pseudotuberculosis IP 32953, complete genomepossible AEC family malate permease3e-145514
NC_010634:3250810:326768532676853268641957Yersinia pseudotuberculosis PB1/+, complete genomeauxin efflux carrier3e-145514
NC_012917:3378759:339316433931643394123960Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeAuxin Efflux Carrier2e-99362
NC_015460:418826:438472438472439428957Gallibacterium anatis UMN179 chromosome, complete genomeputative transporter YfdV9e-52204
NC_004129:1014986:103309110330911034032942Pseudomonas fluorescens Pf-5, complete genomehypothetical protein2e-35149
NC_007963:2777066:277822227782222779169948Chromohalobacter salexigens DSM 3043, complete genomeAuxin Efflux Carrier5e-29128
NC_018868:3036205:306405430640543065019966Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein4e-26118
NC_015977:935798:961728961728962681954Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-1997.1
NC_011894:6888562:691998369199836920912930Methylobacterium nodulans ORS 2060, complete genomeAuxin Efflux Carrier4e-1789
NC_016077:998741:105360010536001054541942Acidaminococcus intestini RyC-MR95 chromosome, complete genomemalonate transporter2e-1583.6
NC_014363:1344768:136534813653481366313966Olsenella uli DSM 7084 chromosome, complete genomeAuxin Efflux Carrier2e-1583.2
NC_012918:356019:358878358878359795918Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-0964.3
NC_016818:2836851:287455528745552875472918Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative permease1e-0964.3
NC_015224:279037:298431298431299390960Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-0963.2