Query: NC_009698:3526359 Clostridium botulinum A str. Hall chromosome, complete genome
Start: 3526359, End: 3545519, Length: 19161
Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria
General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012563:3921859 | 3921859 | 3941113 | 19255 | Clostridium botulinum A2 str. Kyoto, complete genome | 0 | 5122 | BLASTN svg | BLASTP svg |
NC_010516:3724312 | 3724312 | 3743474 | 19163 | Clostridium botulinum B1 str. Okra, complete genome | 0 | 5091 | BLASTN svg | BLASTP svg |
NC_010520:3753875 | 3753875 | 3772988 | 19114 | Clostridium botulinum A3 str. Loch Maree, complete genome | 0 | 4861 | BLASTN svg | BLASTP svg |
NC_008261:2920999 | 2920999 | 2940081 | 19083 | Clostridium perfringens ATCC 13124, complete genome | 7e-65 | 256 | BLASTN svg | BLASTP svg |
NC_013316:120759* | 120759 | 157110 | 36352 | Clostridium difficile R20291, complete genome | 5e-38 | 167 | BLASTN svg | BLASTP svg |
NC_009089:117980* | 117980 | 163116 | 45137 | Clostridium difficile 630, complete genome | 5e-38 | 167 | BLASTN svg | BLASTP svg |
NC_014328:4387303* | 4387303 | 4458527 | 71225 | Clostridium ljungdahlii ATCC 49587 chromosome, complete genome | 3e-36 | 161 | BLASTN svg | BLASTP svg |
NC_010723:298954 | 298954 | 317709 | 18756 | Clostridium botulinum E3 str. Alaska E43, complete genome | 3e-30 | 141 | BLASTN svg | BLASTP svg |
NC_004557:2677155 | 2677155 | 2703882 | 26728 | Clostridium tetani E88, complete genome | 5e-29 | 137 | BLASTN svg | BLASTP svg |
NC_020291:231853 | 231853 | 250265 | 18413 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_015958:2206032* | 2206032 | 2238460 | 32429 | Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014538:1942500 | 1942500 | 1960304 | 17805 | Thermoanaerobacter sp. X513 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_003869:2099000 | 2099000 | 2117917 | 18918 | Thermoanaerobacter tengcongensis MB4, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015555:386000 | 386000 | 404346 | 18347 | Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_007930:180281 | 180281 | 198599 | 18319 | Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118, | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011830:923424 | 923424 | 965786 | 42363 | Desulfitobacterium hafniense DCB-2, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015499:352934 | 352934 | 376451 | 23518 | Thermodesulfobium narugense DSM 14796 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014614:1309203 | 1309203 | 1332817 | 23615 | Clostridium sticklandii, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |