Pre_GI: BLASTN Hits

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Query: NC_009698:2727203 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2727203, End: 2752514, Length: 25312

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:30909543090954312052229569Clostridium botulinum A2 str. Kyoto, complete genome06786BLASTN svgBLASTP svg
NC_010520:29379812937981296593527955Clostridium botulinum A3 str. Loch Maree, complete genome05257BLASTN svgBLASTP svg
NC_010516:29000572900057292557925523Clostridium botulinum B1 str. Okra, complete genome04819BLASTN svgBLASTP svg
NC_008593:10605481060548108560225055Clostridium novyi NT, complete genome6e-100373BLASTN svgBLASTP svg
NC_004557:18269771826977184565818682Clostridium tetani E88, complete genome9e-99369BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome5e-85323BLASTN svgBLASTP svg
NC_010723:80121580121582512923915Clostridium botulinum E3 str. Alaska E43, complete genome8e-81309BLASTN svgBLASTP svg
NC_010674:82819182819184720219012Clostridium botulinum B str. Eklund 17B, complete genome3e-74287BLASTN svgBLASTP svg
NC_014328:10469581046958106876321806Clostridium ljungdahlii ATCC 49587 chromosome, complete genome6e-66260BLASTN svgBLASTP svg
NC_018664:23900023900026409925100Clostridium acidurici 9a chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_020291:49448354944835500759962765Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome5e-42180BLASTN svgBLASTP svg
NC_015913:62485962485964365018792Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome2e-35159BLASTN svgBLASTP svg
NC_016012:56168756168758109919413Candidatus Arthromitus sp. SFB-rat-Yit, complete genome9e-25123BLASTN svgBLASTP svg
NC_009922:2721343*2721343276393542593Alkaliphilus oremlandii OhILAs, complete genome3e-18101BLASTN svgBLASTP svg
NC_009012:2661795*2661795268590824114Clostridium thermocellum ATCC 27405, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011653:1339868*1339868138091441047Thermosipho africanus TCF52B, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018664:16633241663324168566922346Clostridium acidurici 9a chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019896:57759457759460106123468Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_013791:1082951*1082951110442521475Bacillus pseudofirmus OF4 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013642:545464*54546457230426841Thermotoga naphthophila RKU-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010718:2337209*2337209237318135973Natranaerobius thermophilus JW/NM-WN-LF, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006510:3133965*3133965316624032276Geobacillus kaustophilus HTA426, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019978:2260395*2260395228952329129Halobacteroides halobius DSM 5150, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016011:67841967841969889020472Listeria ivanovii subsp. ivanovii PAM 55, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015660:391627*39162741770326077Geobacillus thermoglucosidasius C56-YS93 chromosome, complete3e-0661.9BLASTN svgBLASTP svg