Pre_GI: BLASTN Hits

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Query: NC_009698:2367171 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2367171, End: 2402034, Length: 34864

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012563:2721658*2721658274175820101Clostridium botulinum A2 str. Kyoto, complete genome05126BLASTN svgBLASTP svg
NC_012563:2680246*2680246272077540530Clostridium botulinum A2 str. Kyoto, complete genome05095BLASTN svgBLASTP svg
NC_010516:2511035*2511035254588934855Clostridium botulinum B1 str. Okra, complete genome05019BLASTN svgBLASTP svg
NC_010520:2585014*2585014262041935406Clostridium botulinum A3 str. Loch Maree, complete genome04801BLASTN svgBLASTP svg
NC_014328:1405484*1405484142841522932Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-149537BLASTN svgBLASTP svg
NC_008261:2157713*2157713217590318191Clostridium perfringens ATCC 13124, complete genome2e-134488BLASTN svgBLASTP svg
NC_008262:1835613*1835613185504319431Clostridium perfringens SM101, complete genome5e-132480BLASTN svgBLASTP svg
NC_010520:15860001586000160832222323Clostridium botulinum A3 str. Loch Maree, complete genome7e-85323BLASTN svgBLASTP svg
NC_010516:35931035931038266123352Clostridium botulinum B1 str. Okra, complete genome7e-85323BLASTN svgBLASTP svg
NC_020291:1464500*1464500148221117712Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome6e-76293BLASTN svgBLASTP svg
NC_003366:2057656*2057656208209924444Clostridium perfringens str. 13, complete genome3e-44188BLASTN svgBLASTP svg
NC_012563:519037*51903754582126785Clostridium botulinum A2 str. Kyoto, complete genome2e-38168BLASTN svgBLASTP svg
NC_010520:496500*49650051930622807Clostridium botulinum A3 str. Loch Maree, complete genome6e-36161BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome2e-32149BLASTN svgBLASTP svg
NC_010516:514000*51400053623322234Clostridium botulinum B1 str. Okra, complete genome2e-29139BLASTN svgBLASTP svg
NC_008262:1950205*1950205196967819474Clostridium perfringens SM101, complete genome2e-29139BLASTN svgBLASTP svg
NC_014538:1311500*1311500133539723898Thermoanaerobacter sp. X513 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_014964:11699251169925118860418680Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete1e-24123BLASTN svgBLASTP svg
NC_010520:72531272531274947124160Clostridium botulinum A3 str. Loch Maree, complete genome3e-22115BLASTN svgBLASTP svg
NC_008346:14310511431051145644725397Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete3e-19105BLASTN svgBLASTP svg
NC_010674:24352412435241245936424124Clostridium botulinum B str. Eklund 17B, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014657:944000*94400096534721348Caldicellulosiruptor owensensis OL chromosome, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_013515:347671*34767139636648696Streptobacillus moniliformis DSM 12112, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_011898:513835*51383553654722713Clostridium cellulolyticum H10, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_019970:1343670*1343670136621022541Thermoanaerobacterium thermosaccharolyticum M0795, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_011653:1463743*1463743148807524333Thermosipho africanus TCF52B, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_013216:3376186*3376186339624020055Desulfotomaculum acetoxidans DSM 771, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_003454:983681*983681100260518925Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete2e-1179.8BLASTN svgBLASTP svg
NC_010336:733751*73375175293719187Francisella philomiragia subsp. philomiragia ATCC 25017, complete7e-1177.8BLASTN svgBLASTP svg
NC_011661:1175743*1175743119876723025Dictyoglomus turgidum DSM 6724, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011296:1299388*1299388132999530608Thermodesulfovibrio yellowstonii DSM 11347, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_004461:921364*92136495875837395Staphylococcus epidermidis ATCC 12228, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012563:37298173729817376659036774Clostridium botulinum A2 str. Kyoto, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015167:2068607*2068607209715528549Cellulophaga lytica DSM 7489 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_018721:86553086553088494719418Psychroflexus torquis ATCC 700755 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011772:3787500*3787500381637528876Bacillus cereus G9842, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003909:3587695*3587695360609918405Bacillus cereus ATCC 10987, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004432:1225077*1225077125005124975Mycoplasma penetrans HF-2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004722:3777907*3777907379634818442Bacillus cereus ATCC 14579, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012778:841934*84193489007548142Eubacterium eligens ATCC 27750, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012440:197728*19772822123323506Persephonella marina EX-H1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010730:578493*57849359849320001Sulfurihydrogenibium sp. YO3AOP1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009782:1327340*1327340135080023461Staphylococcus aureus subsp. aureus Mu3, complete genome4e-0661.9BLASTN svgBLASTP svg