Pre_GI: BLASTP Hits

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Query: NC_009698:2727203:2743920 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2743920, End: 2745080, Length: 1161

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002185:3167738:319311031931103194057948Escherichia coli W, complete genome8e-0651.6
NC_011353:3805819:383005738300573831043987Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-0653.9
NC_011741:3030324:305431730543173054889573Escherichia coli IAI1 chromosome, complete genome5e-0652.8
NC_014150:2201251:221656222165622216894333Brachyspira murdochii DSM 12563 chromosome, complete genome2e-1893.6
NC_011748:3196173:322012732201273220774648Escherichia coli 55989, complete genome2e-0653.9
AP010958:3474077:349806834980683498640573Escherichia coli O103:H2 str. 12009 DNA, complete genome5e-0652.8
CP002516:903241:912019912019912966948Escherichia coli KO11, complete genome8e-0651.6
NC_013353:3474077:349806834980683498640573Escherichia coli O103:H2 str. 12009, complete genome5e-0652.8
NC_021508:775264:7889017889017899471047Treponema pallidum subsp. pallidum SS14, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY4e-27122
NC_016842:775368:7890057890057900511047Treponema pallidum subsp. pertenue str. SamoaD chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY4e-27122
NC_015714:768500:7823037823037833491047Treponema paraluiscuniculi Cuniculi A chromosome, complete genomebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY3e-26119
NC_016843:775371:7891927891927902381047Treponema pallidum subsp. pertenue str. Gauthier chromosome,bifunctional chemotaxis protein CheC/flagellar motor switch protein FliY4e-27122
NC_016844:775334:7893597893597904051047Treponema pallidum subsp. pallidum DAL-1 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY6e-27122
NC_016848:775822:7894597894597905051047Treponema pallidum subsp. pertenue str. CDC2 chromosome, completebifunctional chemotaxis protein CheC/flagellar motor switch protein FliY4e-27122
NC_009012:574145:5920165920165932361221Clostridium thermocellum ATCC 27405, complete genomeCheC, inhibitor of MCP methylation2e-69263
NC_014652:628435:6479166479166490461131Caldicellulosiruptor hydrothermalis 108 chromosome, completechec, inhibitor of mcp methylation / flin fusion protein3e-71269
NC_017095:166896:190397190397191011615Fervidobacterium pennivorans DSM 9078 chromosome, complete genomechemotaxis protein CheC, inhibitor of MCP methylation9e-0755.1
NC_011653:1728000:174618717461871746804618Thermosipho africanus TCF52B, complete genomeCheY-P phosphatase CheC2e-0757.4
NC_008555:696217:6972126972126987501539Listeria welshimeri serovar 6b str. SLCC5334, complete genomeflagellar motor switch domain protein5e-33142
NC_013891:640784:6417796417796432871509Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar motor switch domain protein2e-31136
NC_014366:1814000:183272818327281833141414Gamma proteobacterium HdN1, complete genomeFlagellar motor switch FliN1e-20101
NC_020291:4944835:4993760499376049949621203Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar motor switch phosphatase FliY2e-104379
NC_018664:1663324:1671062167106216722071146Clostridium acidurici 9a chromosome, complete genomeflagellar motor switch phosphatase FliY1e-64247
NC_015913:624859:6266526266526277281077Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar motor switch phosphatase FliY3e-72272
NC_009697:2790277:2806994280699428081541161Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar motor switch protein0710
NC_003212:721112:7323047323047338451542Listeria innocua Clip11262, complete genomeflagellar motor switch protein2e-31137
NC_002973:730942:7475427475427490561515Listeria monocytogenes str. 4b F2365, complete genomeflagellar motor switch protein3e-31136
NC_017268:775000:7886717886717897171047Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar motor switch protein4e-27122
NC_010741:775000:7888697888697899151047Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor switch protein4e-27122
NC_004129:1848701:185182918518291852290462Pseudomonas fluorescens Pf-5, complete genomeflagellar motor switch protein7e-2098.6
NC_008277:272741:288467288467288808342Borrelia afzelii PKo, complete genomeflagellar motor switch protein1e-1997.8
NC_006677:435652:446810446810447127318Gluconobacter oxydans 621H, complete genomeflagellar motor switch protein1e-1274.3
NC_012658:2930244:2945156294515629463161161Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar motor switch protein0705
NC_017295:2286911:2305431230543123066181188Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar motor switch protein1e-119430
NC_009617:4946000:4955939495593949571351197Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar motor switch protein5e-108391
NC_003210:721824:7330177330177345641548Listeria monocytogenes EGD-e, complete genomeflagellar motor switch protein2e-31137
NC_012488:732233:7415017415017430481548Listeria monocytogenes Clip81459, complete genomeflagellar motor switch protein3e-31136
NC_007492:1735595:173559517355951736053459Pseudomonas fluorescens PfO-1, complete genomeflagellar motor switch protein5e-2099
NC_009633:2725128:2725128272512827263091182Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar motor switch protein2e-68259
NC_013766:757987:7705407705407720871548Listeria monocytogenes 08-5578 chromosome, complete genomeflagellar motor switch protein2e-31137
NC_011660:1889504:1910686191068619122331548Listeria monocytogenes HCC23 chromosome, complete genomeflagellar motor switch protein3e-31136
NC_012225:1575432:1600390160039016014721083Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein4e-29129
NC_002947:4931476:494885949488594949344486Pseudomonas putida KT2440, complete genomeflagellar motor switch protein3e-2099.8
NC_007759:1356439:135643913564391356930492Syntrophus aciditrophicus SB, complete genomeflagellar motor switch protein9e-2098.2
NC_006156:271410:288358288358288699342Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor switch protein1e-1997.8
NC_012225:1575432:159993915999391600193255Brachyspira hyodysenteriae WA1, complete genomeflagellar motor switch protein2e-1687
NC_009495:2876865:2893582289358228947421161Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar motor switch protein0710
NC_009699:2901497:2917261291726129184211161Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar motor switch protein0705
NC_004557:1826977:1838003183800318392531251Clostridium tetani E88, complete genomeflagellar motor switch protein2e-125449
NC_016012:561687:5662645662645673401077Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar motor switch protein3e-78292
NC_013768:721897:7372447372447387911548Listeria monocytogenes 08-5923, complete genomeflagellar motor switch protein2e-31137
NC_017243:491681:5083175083175093991083Brachyspira intermedia PWS/A chromosome, complete genomeflagellar motor switch protein3e-31136
NC_008599:1489868:149197814919781492808831Campylobacter fetus subsp. fetus 82-40, complete genomeflagellar motor switch protein2e-1584
NC_001318:270488:289576289576289917342Borrelia burgdorferi B31, complete genomeflagellar motor switch protein (fliN)2e-1997.4
NC_000919:773784:7874217874217884671047Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor switch protein (fliY)4e-27122
NC_017297:2905138:2917398291739829185581161Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar motor switch protein FliN0705
NC_019978:625476:6441576441576452901134Halobacteroides halobius DSM 5150, complete genomeflagellar motor switch protein FliN6e-63241
NC_019908:1467000:1480929148092914819751047Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar motor switch protein FliN1e-29130
NC_016751:1979201:1993227199322719946031377Marinitoga piezophila KA3 chromosome, complete genomeflagellar motor switch protein FliN2e-25116
NC_009512:1691930:169493816949381695402465Pseudomonas putida F1, complete genomeflagellar motor switch protein FliN3e-2099.8
NC_015921:272517:288141288141288482342Borrelia bissettii DN127 chromosome, complete genomeflagellar motor switch protein FliN1e-1997.4
NC_013851:3300278:331189933118993312345447Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar motor switch protein FliN4e-1996.3
NC_009654:3849774:387831938783193878780462Marinomonas sp. MWYL1, complete genomeflagellar motor switch protein FliN2e-1790.1
NC_009664:533021:539118539118539867750Kineococcus radiotolerans SRS30216, complete genomeflagellar motor switch protein FliN1e-1584.7
NC_015186:1698000:170739517073951707715321Acidiphilium multivorum AIU301, complete genomeflagellar motor switch protein FliN1e-1170.9
NC_010516:2900057:2912728291272829138881161Clostridium botulinum B1 str. Okra, complete genomeflagellar motor switch protein FliN0706
NC_018607:2375344:2388581238858123896271047Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor switch protein FliN1e-29130
NC_017238:272980:288706288706289047342Borrelia afzelii PKo chromosome, complete genomeflagellar motor switch protein FliN1e-1997.8
NC_014837:2586870:261088226108822611292411Pantoea sp. At-9b chromosome, complete genomeflagellar motor switch protein FliN1e-1997.4
NC_010673:291679:292313292313292657345Borrelia hermsii DAH, complete genomeflagellar motor switch protein FliN2e-1996.7
NC_008435:1215437:130955713095571309955399Rhodopseudomonas palustris BisA53, complete genomeflagellar motor switch protein FliN1e-1170.9
NC_012563:3090954:3107671310767131088311161Clostridium botulinum A2 str. Kyoto, complete genomeflagellar motor switch protein FliN0710
NC_010520:2937981:2953084295308429542441161Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar motor switch protein FliN0705
NC_010723:801215:8012158012158023661152Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar motor switch protein FliN6e-120431
NC_021182:2921000:2936970293697029381181149Clostridium pasteurianum BC1, complete genomeflagellar motor switch protein FliN2e-115416
NC_016894:2931213:2937868293786829390011134Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar motor switch protein FliN2e-34146
NC_014330:1784515:1788618178861817896641047Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor switch protein FliN1e-29131
NC_014500:3023762:306009530600953060511417Dickeya dadantii 3937 chromosome, complete genomeflagellar motor switch protein fliN2e-21103
NC_019940:293476:298826298826299197372Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor switch protein FliN3e-2099.8
NC_008576:4467745:447890444789044479317414Magnetococcus sp. MC-1, complete genomeflagellar motor switch protein FliN5e-1995.9
NC_013223:685628:705832705832706161330Desulfohalobium retbaense DSM 5692, complete genomeflagellar motor switch protein FliN1e-1481.3
NC_009484:1627734:163713316371331637531399Acidiphilium cryptum JF-5 chromosome, complete genomeflagellar motor switch protein FliN1e-1171.2
NC_015425:1207314:1211758121175812130111254Clostridium botulinum BKT015925 chromosome, complete genomeflagellar motor switch protein FliN2e-118425
NC_021184:2238500:2244250224425022456381389Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch protein FliN1e-59230
NC_018604:492068:4964124964124974581047Brachyspira pilosicoli WesB complete genomeflagellar motor switch protein FliN2e-29130
NC_014150:2201251:2215333221533322164121080Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar motor switch protein FliN1e-21104
NC_012880:1765920:183055418305541830964411Dickeya dadantii Ech703, complete genomeflagellar motor switch protein FliN1e-20101
NC_010501:4080937:409817840981784098642465Pseudomonas putida W619, complete genomeflagellar motor switch protein FliN3e-2099.8
NC_014562:1844268:187369818736981874105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar motor switch protein fliN1e-1997.8
NC_008710:277207:291605291605291949345Borrelia turicatae 91E135, complete genomeflagellar motor switch protein FliN4e-1995.9
NC_012440:659646:686871686871687443573Persephonella marina EX-H1, complete genomeflagellar motor switch protein FliN1e-1687.8
NC_020911:2921925:294418129441812944477297Octadecabacter antarcticus 307, complete genomeflagellar motor switch protein FliN6e-1272.4
NC_012438:1211940:124043012404301241008579Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeflagellar motor switch protein FliN4e-1169.7
NC_017192:2469667:246966724696672470548882Arcobacter sp. L, complete genomeflagellar motor switch protein FliY4e-0962.8
NC_009850:1954969:195604519560451956914870Arcobacter butzleri RM4018, complete genomeflagellar motor switch protein FliY2e-1067
NC_017187:1832045:183426918342691835135867Arcobacter butzleri ED-1, complete genomeflagellar motor switch protein FliY5e-1168.9
NC_021184:2238500:225945022594502259845396Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar motor switch/type III secretory pathway protein1e-0861.6
NC_016893:43234:584315843158850420Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar motor switching and energizing component4e-1686.3
NC_015391:2099472:2099472209947221005511080Carnobacterium sp. 17-4 chromosome, complete genomeflagellar motor switching and energizing phosphatase1e-71270
NC_011728:269853:288944288944289285342Borrelia burgdorferi ZS7, complete genomeflagellar switch protein FliY2e-1997.4
NC_008593:1060548:1080379108037910815691191Clostridium novyi NT, complete genomeflagellar switch protein FliY, contains CheC-like domain1e-118426
NC_017986:4374979:437796943779694378451483Pseudomonas putida ND6 chromosome, complete genomeFliN3e-2099.8
CU928145:3196173:322012732201273220774648Escherichia coli 55989 chromosome, complete genomefragment of Type III secretion apparatus protein (part 2)2e-0653.9
CU928160:3030324:305431730543173054889573Escherichia coli IAI1 chromosome, complete genomefragment of Type III secretion apparatus protein (partial)5e-0652.8
NC_004344:26828:572215722157628408Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-1479.7
NC_015707:705628:705628705628706236609Thermotoga thermarum DSM 5069 chromosome, complete genomeMCP methylation inhibitor CheC4e-0756.2
NC_014328:1046958:1058621105862110598261206Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar motor switch protein8e-131466
NC_016011:678419:6865176865176880251509Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar motor switch protein FliY2e-31136
NC_016011:678419:681800681800682099300Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar motor switch protein fliY C-terminal part8e-0652
NC_007519:3527207:354353235435323544059528Desulfovibrio alaskensis G20 chromosome, complete genomesurface presentation of antigens (SPOA) protein4e-21102
NC_009253:2615777:261907526190752619461387Desulfotomaculum reducens MI-1 chromosome, complete genomesurface presentation of antigens (SPOA) protein2e-0860.8
NC_014758:1387470:138896413889641389248285Calditerrivibrio nitroreducens DSM 19672 chromosome, completesurface presentation of antigens (spoa) protein7e-0652
NC_007912:2768363:276796327679632768370408Saccharophagus degradans 2-40, complete genomesurface presentation of antigens (SpoA) protein8e-2098.6
NC_013720:2898639:290010529001052901094990Pirellula staleyi DSM 6068, complete genomesurface presentation of antigens (SPOA) protein6e-0962
NC_011894:6382636:638822663882266388531306Methylobacterium nodulans ORS 2060, complete genomesurface presentation of antigens (SPOA) protein7e-0755.5
NC_013008:3761467:378478337847833785769987Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesurface presentation of antigens protein SpaO2e-0653.9
NC_011751:3285646:330988733098873310834948Escherichia coli UMN026 chromosome, complete genomesurface presentation of antigens protein SpaO2e-0757.4
NC_009800:2995958:302233930223393023286948Escherichia coli HS, complete genometype III secretion apparatus protein EpaO4e-0756.2
NC_009801:3175714:319970331997033200275573Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaO26e-0652.4
NC_002695:3702344:372566037256603726646987Escherichia coli O157:H7 str. Sakai, complete genometype III secretion protein2e-0653.9
NC_002655:3769643:379296537929653793951987Escherichia coli O157:H7 EDL933, complete genometype III secretion protein2e-0653.9
NC_010468:906957:915739915739916686948Escherichia coli ATCC 8739, complete genometype III secretion system apparatus protein YscQ/HrcQ4e-0756.2