Pre_GI: BLASTP Hits

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Query: NC_009698:2727203:2738863 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 2738863, End: 2739081, Length: 219

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009697:2790277:280193728019372802155219Clostridium botulinum A str. ATCC 19397 chromosome, completecarbon storage regulator3e-33140
NC_009495:2876865:288852528885252888743219Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecarbon storage regulator3e-33140
NC_012563:3090954:310261431026143102832219Clostridium botulinum A2 str. Kyoto, complete genomecarbon storage regulator3e-33140
NC_017297:2905138:291228629122862912504219Clostridium botulinum F str. 230613 chromosome, complete genomecarbon storage regulator1e-32138
NC_012658:2930244:294012129401212940339219Clostridium botulinum Ba4 str. 657 chromosome, complete genomecarbon storage regulator1e-32138
NC_009699:2901497:291214829121482912366219Clostridium botulinum F str. Langeland chromosome, complete genomecarbon storage regulator1e-32138
NC_010516:2900057:290760929076092907827219Clostridium botulinum B1 str. Okra, complete genomecarbon storage regulator2e-32137
NC_010520:2937981:294796629479662948184219Clostridium botulinum A3 str. Loch Maree, complete genomecarbon storage regulator3e-32137
NC_021182:2921000:293225229322522932467216Clostridium pasteurianum BC1, complete genomecarbon storage regulator CsrA2e-22104
NC_009617:4946000:495035949503594950577219Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecarbon storage regulator CsrA2e-22103
NC_020291:4944835:498819749881974988415219Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecarbon storage regulator CsrA1e-2098.2
NC_014328:1046958:106469010646901064905216Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative carbon storage regulator2e-2097.8
NC_015425:1207314:121786412178641218085222Clostridium botulinum BKT015925 chromosome, complete genomecarbon storage regulator CsrA3e-2097.1
NC_010674:828191:829847829847830062216Clostridium botulinum B str. Eklund 17B, complete genomecarbon storage regulator7e-2095.9
NC_010723:801215:807025807025807240216Clostridium botulinum E3 str. Alaska E43, complete genomecarbon storage regulator1e-1994.7
NC_017295:2286911:230065423006542300875222Clostridium acetobutylicum EA 2018 chromosome, complete genomeCarbon storage regulator, csrA2e-1890.9
NC_015913:624859:631489631489631713225Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomecarbon storage regulator2e-1477.4
NC_016012:561687:571102571102571326225Candidatus Arthromitus sp. SFB-rat-Yit, complete genomecarbon storage regulator, CsrA8e-1475.9
NC_014650:376070:378051378051378278228Geobacillus sp. Y4.1MC1 chromosome, complete genomecarbon storage regulator CsrA2e-1374.7
NC_011653:466007:476799476799477020222Thermosipho africanus TCF52B, complete genomecarbon storage regulator4e-1373.6
NC_010718:2337209:237080523708052371041237Natranaerobius thermophilus JW/NM-WN-LF, complete genomecarbon storage regulator, CsrA4e-1373.2
NC_009633:760872:777447777447777674228Alkaliphilus metalliredigens QYMF chromosome, complete genomecarbon storage regulator6e-1372.8
NC_020134:2772500:277704127770412777307267Clostridium stercorarium subsp. stercorarium DSM 8532, completecarbon storage regulator7e-1372.8
NC_019978:2260395:227347822734782273708231Halobacteroides halobius DSM 5150, complete genomecarbon storage regulator CsrA8e-1372.4
NC_014378:261064:262089262089262334246Acetohalobium arabaticum DSM 5501 chromosome, complete genomecarbon storage regulator, CsrA3e-1270.5
NC_015660:391627:393625393625393864240Geobacillus thermoglucosidasius C56-YS93 chromosome, completecarbon storage regulator CsrA3e-1270.5
NC_018664:239000:253889253889254218330Clostridium acidurici 9a chromosome, complete genomecarbon storage regulator4e-1270.1
NC_017195:3426000:343496534349653435189225Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completecarbon storage regulator6e-1269.7
NC_013223:724394:725335725335725595261Desulfohalobium retbaense DSM 5692, complete genomecarbon storage regulator, CsrA7e-1269.3
NC_009012:2661795:266773026677302667957228Clostridium thermocellum ATCC 27405, complete genomecarbon storage regulator, CsrA1e-1168.6
NC_014829:3877701:388161838816183881845228Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecarbon storage regulator, CsrA3e-1167
NC_019896:577594:588729588729588953225Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeCarbon storage regulator - like protein4e-1166.6
NC_014915:3259440:328064932806493280888240Geobacillus sp. Y412MC52 chromosome, complete genomecarbon storage regulator, CsrA6e-1166.2
NC_013406:6568273:658420465842046584428225Paenibacillus sp. Y412MC10 chromosome, complete genomecarbon storage regulator, CsrA1e-1065.5
NC_013791:1082951:109933410993341099564231Bacillus pseudofirmus OF4 chromosome, complete genomecarbon storage regulator9e-1165.5
NC_009253:2615777:263490226349022635144243Desulfotomaculum reducens MI-1 chromosome, complete genomecarbon storage regulator CsrA3e-1063.5
NC_006510:3133965:315488231548823155130249Geobacillus kaustophilus HTA426, complete genomecarbon storage regulator4e-1063.5
NC_007759:1356439:137836113783611378600240Syntrophus aciditrophicus SB, complete genomecarbon storage regulator4e-1063.5
NC_012793:3035978:304111530411153041363249Geobacillus sp. WCH70, complete genomecarbon storage regulator, CsrA5e-1063.2
NC_013861:3341955:335664433566443356904261Legionella longbeachae NSW150, complete genomeglobal regulator6e-1062.8
NC_016641:945284:952253952253952486234Paenibacillus terrae HPL-003 chromosome, complete genomecarbon storage regulator6e-1062.8
NC_014098:3030274:304985130498513050114264Bacillus tusciae DSM 2912 chromosome, complete genomecarbon storage regulator, CsrA9e-1062.4
NC_011567:2556915:255691525569152557163249Anoxybacillus flavithermus WK1, complete genomeRNA-binding global regulator CsrA8e-1062.4
NC_007517:480303:485123485123485359237Geobacter metallireducens GS-15, complete genomecarbon storage regulator, CsrA8e-1062.4
NC_015460:1687684:170857717085771708765189Gallibacterium anatis UMN179 chromosome, complete genomecarbon storage regulator1e-0962
NC_012880:1127997:114273211427321142917186Dickeya dadantii Ech703, complete genomecarbon storage regulator, CsrA1e-0961.6
NC_013592:3618248:362182636218263622011186Dickeya dadantii Ech586, complete genomecarbon storage regulator, CsrA1e-0961.6
NC_012914:6583000:660219766021976602436240Paenibacillus sp. JDR-2, complete genomecarbon storage regulator, CsrA2e-0961.6
NC_004193:2553630:256156125615612561785225Oceanobacillus iheyensis HTE831, complete genomecarbon storage regulator2e-0961.2
NC_014387:605711:619047619047619265219Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglobal regulator family protein2e-0961.2
NC_014652:1091610:109431910943191094561243Caldicellulosiruptor hydrothermalis 108 chromosome, completecarbon storage regulator, csra3e-0960.5
NC_008011:924392:933304933304933993690Lawsonia intracellularis PHE/MN1-00, complete genomehypothetical protein3e-0960.5
NC_014109:27500:470944709447273180Candidatus Riesia pediculicola USDA chromosome, complete genomecarbon storage regulator5e-0959.7
NC_009454:2201987:220504022050402205321282Pelotomaculum thermopropionicum SI, complete genomecarbon storage regulator2e-0857.8
NC_011899:1807365:182759218275921827837246Halothermothrix orenii H 168, complete genomecarbon storage regulator, CsrA3e-0857.4
NC_013093:2599591:261551726155172615777261Actinosynnema mirum DSM 43827, complete genomecarbon storage regulator, CsrA3e-0857.4
NC_013522:698114:704672704672704938267Thermanaerovibrio acidaminovorans DSM 6589, complete genomecarbon storage regulator, CsrA4e-0857
NC_019897:128610:178515178515178757243Thermobacillus composti KWC4 chromosome, complete genomecarbon storage regulator CsrA4e-0857
NC_020541:2769419:279027827902782790481204Rhodanobacter sp. 2APBS1, complete genomecarbon storage regulator CsrA5e-0856.6
NC_015172:1075592:108914710891471089395249Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecarbon storage regulator5e-0856.6
NC_007503:861668:863314863314863532219Carboxydothermus hydrogenoformans Z-2901, complete genomecarbon storage regulator5e-0856.2
NC_004578:4432983:445413944541394454333195Pseudomonas syringae pv. tomato str. DC3000, complete genomecarbon storage regulator, putative9e-0855.8
NC_015565:1920329:192570519257051925938234Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecarbon storage regulator CsrA1e-0755.1
NC_016584:4363382:437508143750814375260180Desulfosporosinus orientis DSM 765 chromosome, complete genomecarbon storage regulator2e-0754.7
NC_010337:748467:769908769908770171264Heliobacterium modesticaldum Ice1, complete genomecarbon storage regulator2e-0754.7
NC_013124:1544821:155043615504361550789354Acidimicrobium ferrooxidans DSM 10331, complete genomecarbon storage regulator, CsrA2e-0754.3
NC_009656:2422083:242839924283992428770372Pseudomonas aeruginosa PA7 chromosome, complete genomeregulatory protein4e-0753.5
NC_015589:1240197:126215912621591262404246Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecarbon storage regulator7e-0649.3