Pre_GI: BLASTN Hits

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Query: NC_009664:4696961 Kineococcus radiotolerans SRS30216, complete genome

Start: 4696961, End: 4758416, Length: 61456

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011881:111759917599Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete2e-0973.8BLASTN svgBLASTP svg
NC_013172:606387*60638762543019044Brachybacterium faecium DSM 4810, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_015514:18177318177320534923577Cellulomonas fimi ATCC 484 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015514:3877810*3877810390211124302Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_015671:13989213989216047420583Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015671:30935963093596311775724162Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_015671:557720*55772057761419895Cellvibrio gilvus ATCC 13127 chromosome, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_015859:31265003126500314878722288Corynebacterium variabile DSM 44702 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_015588:2200517*2200517222724526729Isoptericola variabilis 225 chromosome, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_015588:939037*93903796637727341Isoptericola variabilis 225 chromosome, complete genome2e-31147BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome02559BLASTN svgBLASTP svg
NC_009664:4225325*4225325424525319929Kineococcus radiotolerans SRS30216, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_009664:43777774377777440126323487Kineococcus radiotolerans SRS30216, complete genome1e-90343BLASTN svgBLASTP svg
NC_009664:4347718*4347718437438326666Kineococcus radiotolerans SRS30216, complete genome4e-41178BLASTN svgBLASTP svg
NC_009664:63230632308609922870Kineococcus radiotolerans SRS30216, complete genome1e-22117BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome1e-25127BLASTN svgBLASTP svg
NC_013169:24238632423863245464230780Kytococcus sedentarius DSM 20547, complete genome6e-25125BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome1e-22117BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_015635:48643494864349488758323235Microlunatus phosphovorus NM-1, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_008596:41529164152916417912726212Mycobacterium smegmatis str. MC2 155, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008596:13020001302000135784455845Mycobacterium smegmatis str. MC2 155, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_014814:4809607*4809607483377924173Mycobacterium sp. Spyr1 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_021064:1789980*1789980181232622347Propionibacterium avidum 44067, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008271:14084614084616654625701Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence6e-22115BLASTN svgBLASTP svg
NC_009142:29638312963831298735823528Saccharopolyspora erythraea NRRL 2338, complete genome6e-22115BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_014623:8798820*8798820882346624647Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_003888:68531076853107687310519999Streptomyces coelicolor A3(2), complete genome8e-52214BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_014158:14793131479313150261123299Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_015434:24600532460053249159931547Verrucosispora maris AB-18-032 chromosome, complete genome5e-1385.7BLASTN svgBLASTP svg