Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:63230:67390 Kineococcus radiotolerans SRS30216, complete genome

Start: 67390, End: 67755, Length: 366

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016114:648422:652656652656653057402Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator7e-28122
NC_016114:1:137711377114121351Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator4e-27119
NC_018524:4848154:488515148851514885528378Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemerR regulatory family protein7e-27119
NC_015957:7348269:736371973637197364141423Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMerR family transcriptional regulator4e-26116
NC_016113:994469:100038710003871000770384Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceMerR family transcriptional regulator3e-24110
NC_015957:639774:650518650518650886369Streptomyces violaceusniger Tu 4113 chromosome, complete genomeMerR family transcriptional regulator3e-1993.6
NC_013169:87269:957209572096109390Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator8e-1785.9
NC_013169:2423863:244360324436032444019417Kytococcus sedentarius DSM 20547, complete genometranscriptional regulator, MerR family3e-1684
NC_016109:4753493:475499747549974755362366Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator2e-1580.9
NC_009921:565947:570421570421570762342Frankia sp. EAN1pec, complete genometranscriptional regulator, MerR family3e-1580.5
NC_019673:3559185:356777935677793568150372Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MerR family5e-1579.7
NC_003197:4551880:456599945659994566331333Salmonella typhimurium LT2, complete genomeputative regulatory protein2e-1477.4
NC_016810:4573172:458658045865804586912333Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein2e-1477.4
NC_016856:4563435:457883045788304579162333Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein2e-1477.4
NC_016857:4573173:458658145865814586913333Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative regulatory protein2e-1477.4
NC_016860:4649274:466339346633934663725333Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein2e-1477.4
NC_016863:4513106:452643645264364526768333Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein2e-1477.4
NC_016584:487613:497888497888498268381Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator3e-1270.5
NC_015637:819233:8338848338848350651182Vibrio anguillarum 775 chromosome chromosome II, complete sequencemethyltransferase4e-1270.1
NC_010067:3204682:321799332179933218325333Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1168.6
NC_015146:144565:162656162656163048393Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completetranscriptional regulator3e-1167.4
NC_011725:5075285:509110650911065091474369Bacillus cereus B4264 chromosome, complete genomeMerR family transcriptional regulator4e-1166.6
NC_017208:5124333:514214451421445142512369Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMerR family transcriptional regulator6e-1166.2
NC_003909:4854379:487091448709144871282369Bacillus cereus ATCC 10987, complete genometranscriptional regulator, MerR family6e-1166.2
NC_005957:4883306:490110849011084901476369Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, MerR family7e-1165.9
NC_006274:4940922:495729049572904957658369Bacillus cereus E33L, complete genometranscriptional regulator, MerR family7e-1165.9
NC_008600:4898000:491429949142994914667369Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, MerR family7e-1165.9
NC_012472:4908245:492456549245654924933369Bacillus cereus 03BB102, complete genometranscriptional regulator, MerR family7e-1165.9
NC_011773:4940921:495763549576354958003369Bacillus cereus AH820 chromosome, complete genomeMerR family transcriptional regulator7e-1165.9
NC_011969:4841358:485860748586074858975369Bacillus cereus Q1 chromosome, complete genometranscriptional regulator, merr family7e-1165.9
NC_016771:4859040:487628848762884876656369Bacillus cereus NC7401, complete genomeMerR family transcriptional regulator7e-1165.9
NC_016779:4864056:487929848792984879666369Bacillus cereus F837/76 chromosome, complete genomeMerR family transcriptional regulator7e-1165.9
NC_017200:4995075:501240850124085012776369Bacillus thuringiensis serovar finitimus YBT-020 chromosome,MerR family transcriptional regulator7e-1165.9
NC_004722:5057825:507364550736455074013369Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, MerR family7e-1165.9
NC_007530:4877500:489644948964494896814366Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, merr family1e-1065.1
NC_003997:4876415:489632348963234896688366Bacillus anthracis str. Ames, complete genometranscriptional regulator, MerR family1e-1065.1
NC_012581:4882525:489877248987724899137366Bacillus anthracis str. CDC 684 chromosome, complete genomeMerR family transcriptional regulator1e-1065.1
NC_012659:4877410:489634948963494896714366Bacillus anthracis str. A0248, complete genometranscriptional regulator, MerR family1e-1065.1
NC_010184:4909183:492886149288614929229369Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, MerR family2e-1064.3
NC_015690:2553837:256433725643372564726390Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator3e-1063.9
NC_011772:5021404:503916750391675039535369Bacillus cereus G9842, complete genometranscriptional regulator, MerR family4e-1063.5
NC_008712:250240:253388253388253939552Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative Transcriptional regulator, MerR family7e-1062.8
NC_012483:1408500:144328314432831443693411Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, MerR family1e-0962
NC_018720:993869:101806510180651018868804Bifidobacterium asteroides PRL2011 chromosome, complete genometranscriptional regulator, MerR family, with TipAS antibiotic-recognition domain1e-0961.6
NC_013508:1862896:1871474187147418726281155Edwardsiella tarda EIB202, complete genomeputative transcriptional regulator, MerR family2e-0961.2
NC_014210:144036:146517146517146933417Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family2e-0961.2
NC_017904:3084872:309662730966273097076450Mycobacterium sp. MOTT36Y chromosome, complete genometranscriptional regulator4e-0960.5
NC_010602:2244729:227620322762032276586384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator4e-0960.5
NC_010602:2244729:231391023139102314293384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'MerR family transcriptional regulator4e-0960.5
NC_010842:2310756:231929623192962319679384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator4e-0960.5
NC_010842:2250119:228158922815892281972384Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeSoxR-related transcriptional regulator4e-0960.5
NC_006363:36959:583585835858759402Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative transcriptional regulator3e-0960.5
NC_010552:335989:354604354604354990387Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, MerR family3e-0960.5
NC_012587:2298324:230967123096712310054384Rhizobium sp. NGR234, complete genomeputative transcriptional regulator, MerR family5e-0960.1
NC_014831:1906691:193368319336831934192510Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, MerR family7e-0959.3
NC_016935:1636278:170348317034831703866384Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0858.5
NC_009092:261778:2686052686052697831179Shewanella loihica PV-4, complete genometranscriptional regulator, MerR family1e-0858.2
NC_016935:3103430:311255631125563112909354Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0857.8
NC_011420:69843:929229292293323402Rhodospirillum centenum SW, complete genomeHTH-type transcriptional regulator HmrR3e-0857.4
NC_016616:1091606:109800110980011098429429Dechlorosoma suillum PS chromosome, complete genomeCu(I)-responsive transcriptional regulator3e-0857.4
NC_013510:810525:8258188258188271671350Thermomonospora curvata DSM 43183, complete genomealdo/keto reductase3e-0857
NC_015671:3093596:310524731052473105645399Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator3e-0857
NC_016111:5369414:537814953781495378634486Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional activator soxR-like protein4e-0857
NC_008344:1:355913559136067477Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein4e-0857
NC_002927:4392768:441490944149094415373465Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator9e-0855.8
NC_011000:2732330:279523927952392795604366Burkholderia cenocepacia J2315 chromosome 1, complete sequenceMerR family regulatory protein9e-0855.8
NC_010519:1963256:197166419716641972068405Haemophilus somnus 2336 chromosome, complete genomeMerR family transcriptional regulator1e-0755.5
NC_019673:1656680:167013016701301670567438Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0754.7
NC_014815:5888934:589270858927085893130423Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, merr family4e-0753.5
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator4e-0753.5
NC_018868:619113:639254639254639721468Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeMerR family transcriptional regulator4e-0753.5
NC_010162:10208521:102221181022211810222732615Sorangium cellulosum 'So ce 56', complete genomeMerR family transcriptional regulator4e-0753.5
NC_013223:1090397:112491811249181125397480Desulfohalobium retbaense DSM 5692, complete genometranscriptional regulator, MerR family4e-0753.5
NC_015671:255808:293007293007293426420Cellvibrio gilvus ATCC 13127 chromosome, complete genomeMerR family transcriptional regulator6e-0753.1
NC_013552:1240073:125037812503781250806429Dehalococcoides sp. VS, complete genometranscriptional regulator MerR family CueR domain protein5e-0753.1
NC_016627:2593242:259685025968502597614765Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator6e-0752.8
NC_002927:2636694:265893026589302659364435Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator7e-0752.8
NC_015942:787808:788499788499788966468Acidithiobacillus ferrivorans SS3 chromosome, complete genomeMerR family transcriptional regulator9e-0752.4
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator1e-0652.4
NC_003384:109036:114531114531114986456Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric resistance operon regulatory protein1e-0652
NC_011894:4911500:492472249247224925156435Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, MerR family1e-0652
NC_011761:2217632:223334822333482233830483Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeMerR family transcriptional regulator1e-0652
NC_010571:5650806:565551656555165655920405Opitutus terrae PB90-1, complete genometranscriptional regulator, MerR family1e-0652
NC_009142:5425763:543085854308585431265408Saccharopolyspora erythraea NRRL 2338, complete genomeMerR-family transcriptional regulator2e-0651.6
NC_016906:4562874:456287445628744563290417Gordonia polyisoprenivorans VH2 chromosome, complete genomeMerR family transcriptional regulator1e-0651.6
NC_008341:29038:442934429344748456Nitrosomonas eutropha C91 plasmid1, complete sequencetranscriptional regulator, MerR family1e-0651.6
NC_008573:195317:228689228689229144456Shewanella sp. ANA-3 plasmid 1, complete sequencetranscriptional regulator, MerR family1e-0651.6
NC_010410:3606826:364422636442263644681456Acinetobacter baumannii AYE, complete genomeMercuric resistance operon regulatory protein1e-0651.6
NC_008344:1364142:136959713695971370052456Nitrosomonas eutropha C91, complete genometranscriptional regulator, MerR family protein1e-0651.6
NC_009438:236424:250662250662251126465Shewanella putrefaciens CN-32 chromosome, complete genomeMerR family transcriptional regulator2e-0651.2
NC_004461:73390:832838328383690408Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-0651.2
NC_009483:1636189:164299816429981643483486Geobacter uraniireducens Rf4 chromosome, complete genomeMerR family transcriptional regulator2e-0651.2
NC_012778:207415:208340208340208777438Eubacterium eligens ATCC 27750, complete genomeMerR family transcriptional regulator, mercuric resistance operon regulatory protein2e-0651.2
NC_015422:3513689:351964535196453520067423Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator3e-0650.8
NC_010067:3310336:331693133169313317389459Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-0650.8
NC_011992:1179084:119333011933301193809480Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family2e-0650.8
NC_009434:3611738:370624537062453706643399Pseudomonas stutzeri A1501, complete genomeMerR family transcriptional regulator2e-0650.8
NC_011772:4606000:460976846097684610181414Bacillus cereus G9842, complete genometranscriptional regulator, MerR family2e-0650.8
NC_009656:115390:122118122118122516399Pseudomonas aeruginosa PA7 chromosome, complete genomeHg(II)-responsive transcriptional regulator2e-0650.8
NC_011083:403022:447987447987448451465Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Cu(I)-responsive transcriptional regulator4e-0650.4
NC_011080:383441:405320405320405784465Salmonella enterica subsp. enterica serovar Newport str. SL254,Cu(I)-responsive transcriptional regulator4e-0650.4
NC_011149:361765:383657383657384121465Salmonella enterica subsp. enterica serovar Agona str. SL483,Cu(I)-responsive transcriptional regulator4e-0650.4
NC_012125:373630:395509395509395973465Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator4e-0650.4
NC_009349:78000:821538215382587435Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeputative transcriptional regulator MerR4e-0650.4
NC_003384:157158:174890174890175324435Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric resistance operon regulatory protein4e-0650.4
NC_013365:92973:991879918799621435Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeputative transcriptional regulator MerR4e-0650.4
NC_016860:4055117:408876240887624089196435Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator MerR4e-0650.4
NC_006905:4405301:443899744389974439455459Salmonella enterica subsp. enterica serovar Choleraesuis strredox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family)4e-0650.4
NC_011094:4361238:439494043949404395398459Salmonella enterica subsp. enterica serovar Schwarzengrund strredox-sensitive transcriptional activator SoxR4e-0650.4
NC_008347:174000:190633190633191043411Maricaulis maris MCS10, complete genomeputative transcriptional regulator, MerR family4e-0650.4
NC_011274:376970:398848398848399312465Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-0650.4
NC_011386:3723019:372685837268583727277420Oligotropha carboxidovorans OM5, complete genometranscriptional regulator, MerR family3e-0650.4
NC_003888:3602753:361901736190173619469453Streptomyces coelicolor A3(2), complete genomemerR-family transcriptional regulator5e-0650.1
NC_016514:2713834:2717567271756727186251059Enterobacter cloacae EcWSU1 chromosome, complete genomealbicidin resistance protein5e-0650.1
NC_009659:1984980:198573219857321986166435Janthinobacterium sp. Marseille chromosome, complete genometranscriptional regulator MerR4e-0650.1
NC_016109:4088259:410598841059884106383396Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator4e-0650.1
NC_008314:2611873:262853026285302629084555Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, SoxR-family4e-0650.1
NC_009040:43791:599605996060382423Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative transcriptional regulator, MerR family4e-0650.1
NC_017986:1862408:187667818766781877112435Pseudomonas putida ND6 chromosome, complete genomeputative transcriptional regulator MerR4e-0650.1
NC_016147:730810:730810730810731265456Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeMerR family transcriptional regulator6e-0649.7
NC_013440:3870697:388797238879723888379408Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, MerR family6e-0649.7
NC_004757:905417:919523919523919948426Nitrosomonas europaea ATCC 19718, complete genomeBacterial regulatory proteins, MerR family5e-0649.7
NC_011992:1213726:121847812184781218864387Acidovorax ebreus TPSY, complete genometranscriptional regulator, MerR family5e-0649.7
NC_019673:7598026:761095576109557611416462Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MerR family5e-0649.7
NC_016614:686887:705585705585705971387Vibrio sp. EJY3 chromosome 2, complete sequenceCueR family transcriptional regulator7e-0649.3
NC_003305:693810:7074847074847085691086Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, MerR family7e-0649.3
NC_017986:5467279:547330454733045473783480Pseudomonas putida ND6 chromosome, complete genomeMerR family transcriptional regulator7e-0649.3
NC_014618:2139639:2151908215190821529661059Enterobacter cloacae SCF1 chromosome, complete genomeMerR family transcriptional regulator8e-0649.3
NC_008782:1510000:153153815315381531945408Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family8e-0649.3
NC_014121:1589389:1611582161158216126401059Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetranscriptional regulator, MerR family/albicidin resistance protein8e-0649.3
NC_009664:4423829:467065246706524671248597Kineococcus radiotolerans SRS30216, complete genomeputative transcriptional regulator, MerR family9e-0648.9