Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:570768:587546 Kineococcus radiotolerans SRS30216, complete genome

Start: 587546, End: 588061, Length: 516

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:6508500:651538865153886515921534Verrucosispora maris AB-18-032 chromosome, complete genomePEBP family protein4e-46183
NC_018750:1591895:160247616024761603015540Streptomyces venezuelae ATCC 10712, complete genomePhospholipid-binding protein1e-35149
NC_008146:3349415:335388133538813354417537Mycobacterium sp. MCS, complete genomeYbhB and YbcL3e-33140
NC_008705:3377697:338216333821633382699537Mycobacterium sp. KMS, complete genomePEBP family protein3e-33140
NC_009077:3323291:332775733277573328293537Mycobacterium sp. JLS, complete genomePEBP family protein3e-33140
NC_016782:1227246:124621612462161246773558Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein2e-31135
NC_016787:1207488:123564112356411236198558Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein2e-31135
NC_016788:1214026:124562812456281246185558Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-31135
NC_016790:1177349:121301812130181213575558Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein2e-31135
NC_002935:1237585:127245212724521272991540Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-31134
NC_016801:1255611:129127912912791291836558Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein3e-31134
NC_016785:1193471:122626812262681226825558Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein6e-31133
NC_016800:1243000:127461612746161275173558Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein6e-31133
NC_016799:1268706:130150013015001302057558Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein6e-31133
NC_012779:2424967:244479824447982445349552Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-30131
NC_012967:531000:542783542783543334552Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor6e-30130
NC_012947:3231893:324234532423453242896552Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completekinase inhibitor6e-30130
NC_012759:461680:472876472876473427552Escherichia coli BW2952 chromosome, complete genomeputative kinase inhibitor6e-30130
NC_000913:558920:570116570116570667552Escherichia coli K12, complete genomeDLP12 prophage; predicted kinase inhibitor6e-30130
NC_010473:498252:509448509448509999552Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted kinase inhibitor6e-30130
AC_000091:558920:570116570116570667552Escherichia coli W3110 DNA, complete genomepredicted kinase inhibitor6e-30130
NC_013008:2910567:292261229226122923163552Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor7e-30129
NC_013941:699286:710239710239710790552Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphatidylethanolamine-binding protein7e-30129
NC_013508:2356865:238442323844232384974552Edwardsiella tarda EIB202, complete genomeDLP12 prophage; predicted kinase inhibitor1e-29128
NC_011094:1127983:113107811310781131626549Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-29128
NC_011274:1057887:105931310593131059861549Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-29128
NC_012125:2687980:270254627025462703094549Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein2e-29128
NC_011294:1048223:105002410500241050572549Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-29128
NC_011083:1173802:117689711768971177445549Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-29128
NC_011149:1035990:104172810417281042276549Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-29128
NC_010102:2020762:203531720353172035865549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-29127
NC_011205:1147556:115065111506511151199549Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-29127
NC_015859:1631573:165334016533401653900561Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein2e-29127
NC_016514:1627664:162903016290301629587558Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcL6e-29126
NC_017046:1127325:112878411287841129299516Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-28125
NC_003197:1170746:117217211721721172720549Salmonella typhimurium LT2, complete genomeputative outer membrane protein9e-29125
NC_016810:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-29125
NC_016856:1128715:113051611305161131064549Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein9e-29125
NC_016857:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein9e-29125
NC_016860:1168431:116985711698571170405549Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein9e-29125
NC_016863:1128381:112980711298071130355549Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein9e-29125
NC_016831:1950650:196521419652141965762549Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-28125
NC_011601:756885:771868771868772344477Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomekinase inhibitor protein1e-27122
NC_013941:1014386:102682910268291027305477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-27121
NC_013008:918215:934757934757935233477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor protein3e-27121
NC_011353:921500:933164933164933640477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomekinase inhibitor protein3e-27121
NC_002695:917509:929799929799930275477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-27121
NC_002655:919654:931451931451931927477Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-27121
NC_012967:786534:800059800059800535477Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor protein3e-27120
NC_015381:3457784:350546335054633505966504Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-27120
AP010958:867869:881393881393881869477Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted kinase inhibitor3e-27120
NC_013353:867869:881393881393881869477Escherichia coli O103:H2 str. 12009, complete genomekinase inhibitor3e-27120
NC_007912:1924392:194016219401621940734573Saccharophagus degradans 2-40, complete genomephospholipid-binding protein8e-27119
NC_012559:2353236:237554523755452376099555Laribacter hongkongensis HLHK9, complete genomeputative phospholipid-binding protein2e-25115
NC_014121:4043198:406973640697364070212477Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-24110
NC_014215:492855:512935512935513399465Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Phosphatidylethanolamine-binding protein9e-24109
NC_013592:1056500:106081310608131061394582Dickeya dadantii Ech586, complete genomePEBP family protein1e-23108
NC_010622:2385932:240427624042762404785510Burkholderia phymatum STM815 chromosome 1, complete sequencePEBP family protein3e-23107
NC_010334:1561691:156511715651171565644528Shewanella halifaxensis HAW-EB4, complete genomePEBP family protein9e-23106
NC_009901:1516340:151984615198461520373528Shewanella pealeana ATCC 700345, complete genomePEBP family protein1e-22105
NC_008686:1383891:141573814157381416283546Paracoccus denitrificans PD1222 chromosome 1, complete sequencePEBP family protein3e-1994.7
NC_014118:1559770:157122815712281571800573Burkholderia sp. CCGE1002 chromosome chromosome 2, completePEBP family protein2e-1788.6
NC_008391:699222:710842710842711414573Burkholderia cepacia AMMD chromosome 2, complete sequenceYbhB and YbcL2e-1684.7
NC_010162:7620000:763660376366037637082480Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1477.8
NC_004129:195347:210070210070210630561Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein TIGR00481, putative4e-1477.4
NC_003198:1078113:108120810812081081755548Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1477
NC_015574:1845000:185881718588171859275459Methanobacterium sp. SWAN-1 chromosome, complete genomeYbhB YbcL family protein3e-1374.7
NC_000916:191561:209246209246209701456Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein3e-1374.7
NC_011884:2584791:260420626042062604679474Cyanothece sp. PCC 7425, complete genomePEBP family protein4e-1373.9
NC_007963:2644930:265125926512592651735477Chromohalobacter salexigens DSM 3043, complete genomeYbhB and YbcL7e-1373.2
NC_019892:5171629:518949251894925189965474Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family2e-1271.6
NC_013959:2801557:282341728234172823893477Sideroxydans lithotrophicus ES-1 chromosome, complete genomePEBP family protein3e-1271.2
NC_021184:4524500:4537481453748145389081428Desulfotomaculum gibsoniae DSM 7213, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family3e-1270.9
NC_007347:1239982:126166212616621262228567Ralstonia eutropha JMP134 chromosome 1, complete sequenceYbhB and YbcL5e-1270.5
NC_014830:532122:533799533799534236438Intrasporangium calvum DSM 43043 chromosome, complete genomePEBP family protein9e-1269.7
NC_007645:2922190:292293329229332923412480Hahella chejuensis KCTC 2396, complete genomePhospholipid-binding protein1e-1169.3
NC_007355:3580100:359783135978313598415585Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein6e-1167
NC_007517:1107408:112365711236571124187531Geobacter metallireducens GS-15, complete genomeYbhB and YbcL4e-0960.8
NC_011961:891815:892614892614893204591Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehypothetical protein7e-0960.1
NC_016645:245000:246722246722247273552Pyrobaculum sp. 1860 chromosome, complete genomehypothetical protein7e-0856.6
NC_019964:930966:935656935656936153498Halovivax ruber XH-70, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family3e-0754.7
NC_013508:2130681:214982621498262150122297Edwardsiella tarda EIB202, complete genomePEBP family protein5e-0753.9
NC_014828:1019533:1062958106295810645891632Ethanoligenens harbinense YUAN-3 chromosome, complete genomePEBP family protein1e-0652.4
NC_000117:845141:849067849067849519453Chlamydia trachomatis D/UW-3/CX, complete genomehypothetical protein3e-0651.2
NC_006511:1808815:182560418256041826151548Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-0650.4