Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:570768:577618 Kineococcus radiotolerans SRS30216, complete genome

Start: 577618, End: 578034, Length: 417

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013093:2599591:260761626076162608014399Actinosynnema mirum DSM 43827, complete genomeflagellar protein FliS2e-1581.3
NC_020291:4944835:498705849870584987438381Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar assembly protein FliS5e-0753.1
NC_014328:1046958:106571010657101066096387Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar protein FliS5e-0753.1
NC_020134:2772500:277250227725022772906405Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar protein FliS6e-0752.8
NC_015565:1920329:192474419247441925136393Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeflagellar protein FliS2e-0651.2