Pre_GI: BLASTP Hits

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Query: NC_009664:452195:488905 Kineococcus radiotolerans SRS30216, complete genome

Start: 488905, End: 494892, Length: 5988

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:4311300:4323664432366443280764413Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein9e-36154
NC_006270:1415001:1450801145080114538633063Bacillus licheniformis ATCC 14580, complete genomephage related protein4e-1689
NC_006322:1415863:1451663145166314547253063Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-1689
NC_017190:591139:5911395911395954014263Bacillus amyloliquefaciens LL3 chromosome, complete genomestructural protein1e-1484.3
NC_014551:605855:6058556058556109305076Bacillus amyloliquefaciens DSM 7, complete genomestructural protein [Bacillus phage SPP1]1e-1484
NC_014925:607843:6097466097466128653120Staphylococcus pseudintermedius HKU10-03 chromosome, completePhage tail length tape-measure protein3e-1482.8
NC_007168:2349894:2367886236788623710983213Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein5e-1482
NC_020272:2748733:2767590276759027724044815Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein5e-1482
NC_019842:1203291:1203291120329112080934803Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein6e-1481.6
NC_009632:361229:3875323875323905012970Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein3e-1379.3
NC_009487:362475:3874623874623904312970Staphylococcus aureus subsp. aureus JH9 chromosome, completephage-like protein3e-1379.3
NC_017341:1976000:1992127199212719950962970Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,phage tape measure protein4e-1379
NC_007795:1922000:1937698193769819411653468Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage tape measure protein3e-1275.9
NC_009641:1979053:1993831199383119972983468Staphylococcus aureus subsp. aureus str. Newman chromosome,phage tape measure protein3e-1275.9
NC_009632:921759:9460539460539495203468Staphylococcus aureus subsp. aureus JH1 chromosome, completephage tape measure protein3e-1275.9
NC_009487:921884:9461789461789496453468Staphylococcus aureus subsp. aureus JH9 chromosome, completephage-like protein3e-1275.9
NC_009342:2076979:2082056208205620868464791Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-1275.1
NC_016948:2931285:2944448294444829470872640Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein5e-1275.1
NC_006361:4098469:4117916411791641233065391Nocardia farcinica IFM 10152, complete genomeputative phage tail7e-1171.2
NC_009641:1105075:1124831112483111282953465Staphylococcus aureus subsp. aureus str. Newman chromosome,phage tape measure protein1e-1070.9
NC_007622:1842000:1858428185842818618923465Staphylococcus aureus RF122, complete genomehypothetical phage-related protein1e-1070.9
NC_009782:920272:9442959442959477593465Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein1e-1070.9
NC_009641:327325:3471223471223502653144Staphylococcus aureus subsp. aureus str. Newman chromosome,phage tape measure protein1e-1070.9
NC_017093:2173684:2190616219061621937083093Actinoplanes missouriensis 431, complete genomehypothetical protein3e-1069.3
NC_013893:2310495:2322752232275223264143663Staphylococcus lugdunensis HKU09-01 chromosome, complete genomePhage tail length tape-measure protein1e-0967.4
NC_016047:261304:2613042613042666465343Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeTMP repeat family9e-0861.2
NC_003155:5443230:5445508544550854466951188Streptomyces avermitilis MA-4680, complete genomehypothetical protein7e-0861.2
NC_003212:2592600:2595460259546025987413282Listeria innocua Clip11262, complete genomehypothetical protein1e-0760.5
NC_020450:1726234:1726234172623417310244791Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeSLT domain protein3e-0758.9
NC_016789:199503:1995031995032051455643Corynebacterium diphtheriae PW8 chromosome, complete genomeimmunity-specific protein Beta2414e-0758.9
NC_012704:1870000:1890151189015118939213771Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein9e-0757.8
NC_014246:1579811:1586181158618115885322352Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein1e-0657.4
NC_014165:2533040:255899725589972559434438Thermobispora bispora DSM 43833 chromosome, complete genomehypothetical protein2e-0657
NC_015930:1105882:1115589111558911203704782Lactococcus garvieae ATCC 49156, complete genomephage minor tail protein4e-0655.8