Pre_GI: BLASTP Hits

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Query: NC_009664:452195:481587 Kineococcus radiotolerans SRS30216, complete genome

Start: 481587, End: 482963, Length: 1377

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:4299287:4338145433814543394821338Rhodococcus opacus B4, complete genomehypothetical protein7e-118424
NC_013174:2321000:2344691234469123460251335Jonesia denitrificans DSM 20603, complete genomeprotein of unknown function DUF14831e-75284
NC_009380:581000:6172196172196187661548Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein4e-27122
NC_006087:345976:396180396180396866687Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related portal protein2e-21104
NC_008705:3201817:3217669321766932189881320Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF14835e-1789.4
NC_006087:345976:395410395410396117708Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage-related portal protein1e-1688.2
NC_016111:1766010:178895817889581789776819Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-1273.2
NC_017904:2724941:2736036273603627373731338Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein2e-0963.9