Pre_GI: BLASTP Hits

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Query: NC_009664:452195:454079 Kineococcus radiotolerans SRS30216, complete genome

Start: 454079, End: 455725, Length: 1647

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008148:2290806:2315760231576023172981539Rubrobacter xylanophilus DSM 9941, complete genomeUDP-N-acetylmuramyl-tripeptide synthetases1e-66254
NC_016785:1586546:1592204159220415937451542Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase5e-64245
NC_016800:1639373:1645025164502516465661542Corynebacterium diphtheriae BH8 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase6e-64245
NC_016787:1605536:1611188161118816127291542Corynebacterium diphtheriae HC03 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase1e-63244
NC_016799:1667338:1672990167299016745311542Corynebacterium diphtheriae 31A chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase3e-63243
NC_016790:1581411:1587063158706315886041542Corynebacterium diphtheriae VA01 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase3e-63243
NC_016788:1609011:1614663161466316162041542Corynebacterium diphtheriae HC04 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase3e-63243
NC_016783:1636820:1642472164247216440131542Corynebacterium diphtheriae INCA 402 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase1e-62241
NC_015757:158014:1701311701311716091479Sulfobacillus acidophilus TPY chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase6e-59228
NC_016884:2759226:2768432276843227699101479Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase6e-59228
NC_017079:1084684:1105410110541011070591650Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase7e-58225
NC_014171:3812247:3818095381809538195701476Bacillus thuringiensis BMB171 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase8e-57221
NC_004722:3886800:3895224389522438966991476Bacillus cereus ATCC 14579, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase8e-57221
NC_011725:3928853:3937277393727739387521476Bacillus cereus B4264 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_005957:3746891:3755167375516737566421476Bacillus thuringiensis serovar konkukian str. 97-27, completeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_003997:3724702:3732971373297137344461476Bacillus anthracis str. Ames, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_005945:3725397:3733666373366637351411476Bacillus anthracis str. Sterne, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_007530:3724829:3733098373309837345731476Bacillus anthracis str. 'Ames Ancestor', complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_012659:3724729:3732998373299837344731476Bacillus anthracis str. A0248, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_014335:3675456:3683732368373236852071476Bacillus cereus biovar anthracis str. CI chromosome, completeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-56220
NC_006274:3805134:3813410381341038148851476Bacillus cereus E33L, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase6e-56219
NC_017208:3928161:3934877393487739363521476Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase9e-56218
NC_012563:1704345:1730453173045317319041452Clostridium botulinum A2 str. Kyoto, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase1e-55218
NC_012658:1581486:1592136159213615935871452Clostridium botulinum Ba4 str. 657 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase1e-55218
NC_011772:3896635:3903304390330439047791476Bacillus cereus G9842, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase2e-55217
NC_011969:3657360:3665636366563636671111476Bacillus cereus Q1 chromosome, complete genomeudp-N-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase5e-55215
NC_016771:3665773:3674048367404836755231476Bacillus cereus NC7401, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase5e-55215
NC_013960:489616:4959694959694975401572Nitrosococcus halophilus Nc4 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-53211
NC_014550:2355500:2358108235810823597001593Arthrobacter arilaitensis Re117, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-53210
NC_004663:4430054:4447131444713144485791449Bacteroides thetaiotaomicron VPI-5482, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase3e-53210
NC_006576:2610565:2632099263209926336071509Synechococcus elongatus PCC 6301, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase4e-53209
NC_007604:1512709:1534874153487415363671494Synechococcus elongatus PCC 7942, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase4e-53209
NC_014761:1588755:1594865159486515962981434Oceanithermus profundus DSM 14977 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase2e-52207
NC_015161:162000:1813691813691828441476Deinococcus proteolyticus MRP chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase2e-52207
NC_016632:230500:2380472380472395341488Serratia symbiotica str. 'Cinara cedri' chromosome, completeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase6e-52205
NC_014315:226693:2284272284272299861560Nitrosococcus watsoni C-113 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase6e-52205
NC_007484:3231937:3246075324607532476341560Nitrosococcus oceani ATCC 19707, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase7e-51202
NC_020291:2873000:2883810288381028852731464Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE1e-50201
NC_014926:795549:8119548119548134111458Thermovibrio ammonificans HB-1 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-49198
NC_010830:757854:7693247693247707871464Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein1e-49197
NC_014221:3068222:3068222306822230697361515Truepera radiovictrix DSM 17093 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-48194
NC_009615:2902871:2936500293650029379601461Parabacteroides distasonis ATCC 8503 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-48194
NC_012560:1260031:1282485128248512839481464Azotobacter vinelandii DJ, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase7e-48192
NC_014041:4093190:4121301412130141227311431Zunongwangia profunda SM-A87 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase1e-47191
NC_009659:3384997:3384997338499733865231527Janthinobacterium sp. Marseille chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-47191
NC_015638:591964:6080956080956095581464Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase3e-47190
NC_009348:381752:3995973995974010811485Aeromonas salmonicida subsp. salmonicida A449, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelateligase5e-47189
NC_018697:361339:3696783696783712311554Cycloclasticus sp. P1 chromosome, complete genomeudp-n-acetylmuramoylalanyl-d-glutamate-2, 6-diaminopimelate ligase protein2e-46187
NC_014330:2268773:2269174226917422706971524Brachyspira pilosicoli 95/1000 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-46187
NC_018607:1803500:1821305182130518228281524Brachyspira pilosicoli B2904 chromosome, complete genomeUDP-N-acetylmuramyl tripeptide synthetase2e-46187
NC_018604:1045774:1046175104617510476981524Brachyspira pilosicoli WesB complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-46187
NC_015500:2197000:2213169221316922148421674Treponema brennaborense DSM 12168 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase9e-46185
NC_014934:2519999:2525346252534625268091464Cellulophaga algicola DSM 14237 chromosome, complete genomeudp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelateligase1e-45184
NC_005955:1029435:1049441104944110508921452Bartonella quintana str. Toulouse, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase2e-44180
NC_020301:1132927:1152864115286411543151452Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase2e-44180
NC_010572:188500:1899991899991914741476Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative UDP-N-acetylmuramyl tripeptide synthase3e-44179
NC_007516:731193:7537557537557552601506Synechococcus sp. CC9605, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase6e-44179
NC_020300:1041523:1061475106147510629261452Bartonella australis Aust/NH1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase1e-43178
NC_013132:8732093:8734208873420887356741467Chitinophaga pinensis DSM 2588, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-43177
NC_012846:1551000:1570991157099115724421452Bartonella grahamii as4aup, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase5e-43176
NC_016148:1021138:1030519103051910320541536Thermovirga lienii DSM 17291 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase8e-43175
NC_018419:509500:5269865269865284731488Secondary endosymbiont of Ctenarytaina eucalypti chromosome,UDP-N-acetylmuramyl-tripeptide synthetase1e-42174
NC_019907:773944:7979767979767993041329Liberibacter crescens BT-1 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase1e-41171
NC_009654:2958316:2962108296210829635741467Marinomonas sp. MWYL1, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-40167
NC_016751:1227495:1244192124419212456791488Marinitoga piezophila KA3 chromosome, complete genomeUDP-N-acetylmuramyl tripeptide synthetase2e-38160
NC_009901:4627998:4640039464003946415051467Shewanella pealeana ATCC 700345, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-37157
NC_004545:229771:2373072373072388331527Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase1e-37157
NC_015276:2769000:2792870279287027943601491Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase2e-36154
NC_009465:171000:1710681710681724621395Candidatus Vesicomyosocius okutanii HA, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase3e-35150
NC_006833:637964:6408436408436423331491Wolbachia endosymbiont strain TRS of Brugia malayi, completeUDP-N-acetylmuramyl tripeptide synthase1e-34148
NC_015144:693958:7089917089917104571467Weeksella virosa DSM 16922 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase1e-33145
NC_019978:416637:4166374166374181511515Halobacteroides halobius DSM 5150, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase1e-30135
NC_013203:1351941:1363950136395013655031554Atopobium parvulum DSM 20469, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-28127
NC_004061:237205:2446602446602461551496Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome7e-28125
NC_009662:222964:2414462414462427381293Nitratiruptor sp. SB155-2, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase4e-27123
NC_008599:29000:4859648596498851290Campylobacter fetus subsp. fetus 82-40, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase2e-25117
NC_014363:1902868:1927125192712519287231599Olsenella uli DSM 7084 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase2e-25117
NC_017096:1147441:1147441114744111488801440Caldisericum exile AZM16c01, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase3e-25116
NC_009715:1877825:1879954187995418812521299Campylobacter curvus 525.92 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase6e-24112
NC_007575:319119:3321643321643334651302Sulfurimonas denitrificans DSM 1251, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase8e-24112
NC_015389:175406:1890531890531906091557Coriobacterium glomerans PW2 chromosome, complete genomeUDP-N-acetylmuramyl-tripeptide synthetase9e-24112
NC_017187:500638:5043465043465056261281Arcobacter butzleri ED-1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase1e-21104
NC_014210:1625954:1628915162891516302941380Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase3e-1377
NC_013960:489616:4975584975584989041347Nitrosococcus halophilus Nc4 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase2e-1067.8
NC_012560:1260031:1283941128394112853081368Azotobacter vinelandii DJ, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase3e-1067
NC_014550:2355500:2356600235660023580571458Arthrobacter arilaitensis Re117, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase7e-1066.2
NC_007484:3231937:3244711324471132460751365Nitrosococcus oceani ATCC 19707, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase3e-0963.9
NC_011837:165913:1699821699821713581377Clostridium kluyveri NBRC 12016, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase4e-0963.5
NC_009706:165913:1699821699821713581377Clostridium kluyveri DSM 555 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase4e-0963.5
NC_014315:226693:2299862299862313501365Nitrosococcus watsoni C-113 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase1e-0862
NC_009901:4627998:4638663463866346400421380Shewanella pealeana ATCC 700345, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase2e-0861.2
NC_013730:2403930:2409711240971124109971287Spirosoma linguale DSM 74, complete genomeFolC bifunctional protein4e-0860.1
NC_016584:5420823:5420823542082354221481326Desulfosporosinus orientis DSM 765 chromosome, complete genomebifunctional folylpolyglutamate synthase/dihydrofolate synthase4e-0860.1
NC_016148:1021138:1034437103443710358101374Thermovirga lienii DSM 17291 chromosome, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase4e-0860.1
NC_012781:2802000:2819363281936328207571395Eubacterium rectale ATCC 33656, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase6e-0859.7
NC_009921:8717659:8719908871990887212511344Frankia sp. EAN1pec, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase7e-0859.3
NC_015687:3326461:3339893333989333412811389Clostridium acetobutylicum DSM 1731 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase1e-0758.5
NC_003030:3324834:3338267333826733396551389Clostridium acetobutylicum ATCC 824, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase1e-0758.5
NC_014831:388007:4153504153504170441695Thermaerobacter marianensis DSM 12885 chromosome, complete genomeUDP-N-acetylmuramoylalanine/D-glutamate ligase3e-0757.4
NC_020054:3929181:3936292393629239375871296Fibrella aestuarina BUZ 2 drat genomeFolylpolyglutamate synthase3e-0757
NC_014958:629459:6479226479226491661245Deinococcus maricopensis DSM 21211 chromosome, complete genomeFolC bifunctional protein4e-0756.6
NC_014377:669216:6846526846526859561305Thermosediminibacter oceani DSM 16646 chromosome, complete genomeFolC bifunctional protein5e-0653.1