Pre_GI: BLASTP Hits

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Query: NC_009664:452195:452195 Kineococcus radiotolerans SRS30216, complete genome

Start: 452195, End: 453997, Length: 1803

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:1075592:1095774109577411005974824Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecell wall binding repeat 2-containing protein8e-1582.4
NC_014830:335380:3522053522053539561752Intrasporangium calvum DSM 43043 chromosome, complete genomeDomain of unknown function DUF19944e-1480.1
NC_016584:3847663:3863026386302638676574632Desulfosporosinus orientis DSM 765 chromosome, complete genomecell wall-binding protein3e-1377.4
NC_010376:28812:3724337243419074665Finegoldia magna ATCC 29328, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1376.6
NC_014328:2426921:2436213243621324391222910Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-1275.1
NC_010376:186510:1934951934951954681974Finegoldia magna ATCC 29328, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-1274.3
NC_007907:3722500:3752354375235437540301677Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1172
NC_016584:1436710:1446961144696114515414581Desulfosporosinus orientis DSM 765 chromosome, complete genomegluconolactonase2e-1171.2
NC_010376:28812:3102331023369055883Finegoldia magna ATCC 29328, complete genomecell wall-associated serine proteinase precursor2e-1171.2
NC_007907:3722500:3759012375901237609401929Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1170.9
NC_018515:595500:6153216153216173332013Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecell wall-binding protein8e-1169.3
NC_011830:4722607:4749674474967447513861713Desulfitobacterium hafniense DCB-2, complete genomeIg domain protein group 2 domain protein1e-1068.6
NC_015520:224136:2513782513782550163639Mahella australiensis 50-1 BON chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin2e-1068.2
NC_018515:1406816:1421052142105214269855934Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein2e-1067.8
NC_010376:49185:6033260332680177686Finegoldia magna ATCC 29328, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-1067.8
NC_007907:5104476:5125684512568451277202037Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1067.8
NC_007907:3722500:3756571375657137589492379Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1066.6
NC_004557:806878:8130058130058150082004Clostridium tetani E88, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1066.2
NC_009706:2925000:2942035294203529435131479Clostridium kluyveri DSM 555 chromosome, complete genomecell wall binding protein7e-1066.2
NC_011837:2856500:2873537287353728750391503Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-1066.2
NC_018515:1406816:1414764141476414208416078Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehypothetical protein8e-1065.9
NC_017179:3082000:3082047308204730838821836Clostridium difficile BI1, complete genomecell surface protein1e-0965.9
NC_013315:3073652:3074095307409530759301836Clostridium difficile CD196 chromosome, complete genomecell surface protein1e-0965.9
NC_015172:2986867:3028296302829630304672172Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecell wall binding repeat 2-containing protein1e-0965.5
NC_014328:2426921:2442291244229124442551965Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein1e-0965.5
NC_007907:2249607:2251795225179522543742580Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0965.1
NC_011830:3528665:3530497353049735326172121Desulfitobacterium hafniense DCB-2, complete genomeputative cell wall binding repeat 2-containing protein2e-0964.3
NC_015520:2567329:2581460258146025833461887Mahella australiensis 50-1 BON chromosome, complete genometransglutaminase domain-containing protein4e-0963.9
NC_006322:3628143:3628143362814336302872145Bacillus licheniformis ATCC 14580, complete genomeLytB5e-0963.5
NC_006270:3627974:3627974362797436301182145Bacillus licheniformis ATCC 14580, complete genomemodifier protein of major autolysin LytC (CWBP76)5e-0963.5
NC_010376:1711182:1722867172286717242971431Finegoldia magna ATCC 29328, complete genomeN-acetylmuramoyl-L-alanine amidase6e-0963.2
NC_014328:2426921:2430181243018124320701890Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein8e-0962.8
NC_009664:3969609:3988523398852339899501428Kineococcus radiotolerans SRS30216, complete genomeputative cell wall binding repeat 2-containing protein8e-0962.8
NC_009698:2265475:2286166228616622877821617Clostridium botulinum A str. Hall chromosome, complete genomeamidase9e-0962.4
NC_009089:3241918:3245004324500432468361833Clostridium difficile 630, complete genomecell surface protein9e-0962.4
NC_013315:1707293:1727689172768917300882400Clostridium difficile CD196 chromosome, complete genomepenicillin-binding protein1e-0862
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)2e-0861.6
NC_009089:3241918:3241918324191832443292412Clostridium difficile 630, complete genomecell surface protein (putative cell surface-associated cysteine protease)3e-0860.8
NC_004557:691944:7116347116347131511518Clostridium tetani E88, complete genomeputative S-layer protein/internalin A-like/N-acetylmuramoyl-L-alanine amidase3e-0860.8
NC_015520:1683616:1690889169088917007769888Mahella australiensis 50-1 BON chromosome, complete genomeIg family protein3e-0860.8
NC_018515:595500:6120286120286152403213Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecell wall-binding protein3e-0860.8
NC_011830:4399642:440620144062014407181981Desulfitobacterium hafniense DCB-2, complete genomeputative cell wall binding repeat 2-containing protein4e-0860.5
NC_018866:108812:1241191241191256331515Dehalobacter sp. DCA chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0860.5
NC_018867:179975:1917141917141932281515Dehalobacter sp. CF chromosome, complete genomehypothetical protein4e-0860.5
NC_004557:806878:8150588150588161191062Clostridium tetani E88, complete genomeinternalin-like/N-acetylmuramoyl-L-alanine amidase5e-0860.1
NC_014328:1108479:1114075111407511163602286Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative surface-layer protein4e-0860.1
NC_015172:1471501:14866231486623149964213020Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecell wall binding repeat 2-containing protein7e-0859.3
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0758.2
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)2e-0758.2
NC_014328:3336000:3349827334982733513021476Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-0758.2
NC_014328:3294086:3295757329575732967911035Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cell wall-binding protein2e-0758.2
NC_011830:4722607:4758940475894047613272388Desulfitobacterium hafniense DCB-2, complete genomeputative cell wall binding repeat 2-containing protein2e-0757.8
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-0757.4
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-0757.4
NC_014328:522045:5382445382445415763333Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative surface-layer protein4e-0757
NC_011830:4722607:4756991475699147589041914Desulfitobacterium hafniense DCB-2, complete genomeIg domain protein4e-0757
NC_007907:2249607:2257635225763522635325898Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0756.2
NC_015520:224136:2438912438912469293039Mahella australiensis 50-1 BON chromosome, complete genomecell wall binding repeat 2-containing protein1e-0655.1
NC_011837:3052000:3056664305666430599813318Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0655.1
NC_018515:4474000:4494291449429144985144224Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecell wall-binding protein2e-0654.7
NC_018515:4442500:4457444445744444590811638Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecell wall-binding protein2e-0654.3
NC_007907:2995889:3013521301352130148401320Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0654.3
NC_014169:2234249:2246905224690522489532049Bifidobacterium longum subsp. longum JDM301 chromosome, completehypothetical protein4e-0653.9
NC_014246:611275:61127561127562342112147Mobiluncus curtisii ATCC 43063 chromosome, complete genomebacterial Ig-like domain-containing protein6e-0653.1