Pre_GI: BLASTP Hits

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Query: NC_009664:4347718:4354459 Kineococcus radiotolerans SRS30216, complete genome

Start: 4354459, End: 4355031, Length: 573

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:3417951:343191734319173432552636Serratia sp. AS12 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent6e-1477.4
NC_015566:3417951:343376434337643434384621Serratia sp. AS12 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent4e-1374.7
NC_017186:7480714:749649874964987497118621Amycolatopsis mediterranei S699 chromosome, complete genomereductase1e-1169.3
NC_014318:7480669:749645374964537497073621Amycolatopsis mediterranei U32 chromosome, complete genomereductase1e-1169.3
NC_017986:5797044:582408258240825824711630Pseudomonas putida ND6 chromosome, complete genomeNADP oxidoreductase, coenzyme F420-dependent4e-0961.2
NC_009921:4186000:419049341904934191161669Frankia sp. EAN1pec, complete genomeNADP oxidoreductase coenzyme F420-dependent8e-0960.1
NC_017186:7480714:749967274996727500295624Amycolatopsis mediterranei S699 chromosome, complete genomereductase1e-0859.7
NC_014318:7480669:749962774996277500250624Amycolatopsis mediterranei U32 chromosome, complete genomereductase1e-0859.7
NC_015312:3290887:329741132974113298091681Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent7e-0857