Pre_GI: BLASTP Hits

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Query: NC_009664:3969609:3979848 Kineococcus radiotolerans SRS30216, complete genome

Start: 3979848, End: 3980330, Length: 483

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:3969609:397936739793673979819453Kineococcus radiotolerans SRS30216, complete genomesecretory protein8e-1476.3
NC_015671:1950081:195827319582731958710438Cellvibrio gilvus ATCC 13127 chromosome, complete genomesecretory protein2e-1375.1
NC_013521:1976331:198460819846081985015408Sanguibacter keddieii DSM 10542, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein2e-1168.6
NC_008820:1818695:184166318416631842142480Prochlorococcus marinus str. MIT 9303, complete genomepossible pilin8e-0856.2
NC_008319:615135:631334631334631888555Synechococcus sp. CC9311, complete genomepossible pilin1e-0755.8
NC_000911:1284552:129699312969931297499507Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G2e-0754.7
NC_017039:1283732:129606512960651296571507Synechocystis sp. PCC 6803 substr. PCC-P, complete genomegeneral secretion pathway protein G2e-0754.7
NC_017052:1283720:129605312960531296559507Synechocystis sp. PCC 6803 substr. PCC-N, complete genomegeneral secretion pathway protein G2e-0754.7
NC_017277:1283477:129581012958101296316507Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G2e-0754.7
NC_012660:3573154:357819835781983578647450Pseudomonas fluorescens SBW25 chromosome, complete genomegeneral secretion pathway protein G/T3e-0754.3
NC_000911:1284552:129638212963821296894513Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G5e-0753.9
NC_017039:1283732:129545412954541295966513Synechocystis sp. PCC 6803 substr. PCC-P, complete genomegeneral secretion pathway protein G5e-0753.9
NC_017052:1283720:129544212954421295954513Synechocystis sp. PCC 6803 substr. PCC-N, complete genomegeneral secretion pathway protein G5e-0753.9
NC_017277:1283477:129519912951991295711513Synechocystis sp. PCC 6803, complete genomegeneral secretion pathway protein G5e-0753.9
NC_009481:1638394:164415016441501644614465Synechococcus sp. WH 7803 chromosome, complete genomepili subunit superfamily protein5e-0753.5
NC_007492:3655545:366053536605353660993459Pseudomonas fluorescens PfO-1, complete genomeGeneral secretion pathway protein G6e-0753.5
NC_008319:615135:624640624640625146507Synechococcus sp. CC9311, complete genomepossible pilin7e-0753.1
NC_014654:1581689:158168915816891582123435Halanaerobium sp. 'sapolanicus' chromosome, complete genomeTfp pilus assembly protein, major pilin PilA8e-0752.8
NC_015581:1133775:115115911511591151596438Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomegeneral secretion pathway protein G9e-0752.8
NC_010322:768849:773584773584773994411Pseudomonas putida GB-1 chromosome, complete genomefimbrial protein pilin2e-0652
NC_009482:485238:497989497989498504516Synechococcus sp. RCC307 chromosome, complete genomepili subunit superfamily protein2e-0651.6
NC_008027:2397255:241184224118422412288447Pseudomonas entomophila L48, complete genomeProbable type II secretion pathway protein G, transport across outer membrane2e-0651.6
NC_013946:879199:882767882767883114348Meiothermus ruber DSM 1279 chromosome, complete genomehypothetical protein5e-0650.4
NC_019978:1816940:181963618196361820067432Halobacteroides halobius DSM 5150, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein5e-0650.4
NC_014761:516981:532287532287532679393Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein6e-0650.1
NC_014935:1999653:201972620197262020052327Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein9e-0649.3