Pre_GI: BLASTP Hits

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Query: NC_009664:3718927:3724917 Kineococcus radiotolerans SRS30216, complete genome

Start: 3724917, End: 3725285, Length: 369

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015588:1965787:198187919818791982229351Isoptericola variabilis 225 chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-51200
NC_014151:2312000:232770523277052328055351Cellulomonas flavigena DSM 20109 chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-51200
NC_015514:2414617:243305024330502433400351Cellulomonas fimi ATCC 484 chromosome, complete genomeiron-sulfur cluster assembly accessory protein4e-51199
NC_015671:1540860:154610115461011546451351Cellvibrio gilvus ATCC 13127 chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-50197
NC_013169:1661135:167354816735481673907360Kytococcus sedentarius DSM 20547, complete genomeIron-sulfur cluster assembly accessory protein4e-50196
NC_014643:2056280:214296421429642143317354Rothia dentocariosa ATCC 17931 chromosome, complete genomeiron-sulfur cluster assembly protein IscA8e-49191
NC_012803:1302261:132118713211871321579393Micrococcus luteus NCTC 2665, complete genomeIron-sulfur cluster assembly accessory protein1e-47188
NC_010617:1428902:144458814445881444956369Kocuria rhizophila DC2201, complete genomeputative iron-sulfur cluster assembly protein IscA1e-45181
NC_014210:3763940:377304337730433773390348Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,iron-sulfur cluster assembly accessory protein3e-45179
NC_019673:1656680:166804716680471668457411Saccharothrix espanaensis DSM 44229 complete genomeIron-sulfur cluster assembly accessory protein5e-45179
NC_010572:6293417:629486962948696295225357Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-44176
NC_021177:1922930:194284319428431943199357Streptomyces fulvissimus DSM 40593, complete genomeIron-sulfur cluster assembly accessory protein6e-44175
NC_018750:2005229:202557420255742025930357Streptomyces venezuelae ATCC 10712, complete genomeprobable iron binding protein of the HesB_IscA_SufA family2e-39160
NC_015953:1756493:177341417734141773770357Streptomyces sp. SirexAA-E chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-39160
NC_018750:2005229:201753520175352017891357Streptomyces venezuelae ATCC 10712, complete genomeprobable iron binding protein of the HesB_IscA_SufA family6e-39159
NC_003888:2305901:232436823243682324724357Streptomyces coelicolor A3(2), complete genomehypothetical protein8e-39158
NC_004369:2203947:221972722197272220191465Corynebacterium efficiens YS-314, complete genomehypothetical protein1e-38158
NC_016802:1615748:163086616308661631210345Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein5e-38155
NC_008340:480399:483341483341483709369Alkalilimnicola ehrlichei MLHE-1, complete genomeiron-sulfur cluster assembly accessory protein3e-24110
NC_013889:413909:419762419762420142381Thioalkalivibrio sp. K90mix chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-22104
NC_011184:2369662:239248123924812392822342Vibrio fischeri MJ11 chromosome I, complete sequenceiron-binding protein ErpA2e-21100
NC_014212:2776457:277792627779262778345420Meiothermus silvanus DSM 9946 chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-2199.8
NC_010278:1625695:163268516326851633026342Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,iron-sulfur cluster insertion protein ErpA5e-2199.4
NC_008789:942309:958205958205958576372Halorhodospira halophila SL1, complete genomeiron-sulfur cluster assembly accessory protein1e-2098.6
NC_010939:1633000:163771416377141638055342Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein2e-2097.8
NC_009053:1668500:167551216755121675853342Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-2097.1
NC_004556:1933944:193641719364171936803387Xylella fastidiosa Temecula1, complete genomeHesB-like protein7e-2095.9
NC_011601:149428:187370187370187714345Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeiron-sulfur cluster insertion protein ErpA1e-1995.1
NC_008025:316302:319325319325319747423Deinococcus geothermalis DSM 11300, complete genomeHesB/YadR/YfhF1e-1995.1
NC_014820:71565:105653105653106003351Cenarchaeum symbiosum A, complete genomehypothetical protein1e-1995.1
NC_013166:417862:421665421665421991327Kangiella koreensis DSM 16069, complete genomeiron-sulfur cluster assembly accessory protein2e-1994.7
NC_006570:707280:720083720083720433351Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein2e-1994.4
NC_008601:631504:643949643949644299351Francisella tularensis subsp. novicida U112, complete genomehypothetical protein2e-1994.4
NC_008245:707984:720035720035720385351Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein2e-1994.4
NC_007880:1456705:146506714650671465417351Francisella tularensis subsp. holarctica, complete genomehypothetical protein2e-1994.4
NC_016933:783938:795989795989796339351Francisella tularensis TIGB03 chromosome, complete genomeputative iron binding protein from the HesB_IscA_SufA family2e-1994.4
NC_016937:707279:720082720082720432351Francisella tularensis subsp. tularensis TI0902 chromosome,putative iron binding protein from the HesB_IscA_SufA family2e-1994.4
NC_015696:1749863:176159817615981761948351Francisella sp. TX077308 chromosome, complete genomeputative iron binding protein3e-1994
NC_009654:1123709:112733911273391127686348Marinomonas sp. MWYL1, complete genomeiron-sulfur cluster assembly accessory protein3e-1993.6
NC_010336:213148:242390242390242740351Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein3e-1993.6
NC_008095:6253610:625409462540946254435342Myxococcus xanthus DK 1622, complete genomeiron-sulfur cluster assembly accessory protein6e-1992.8
NC_020388:693479:694398694398694757360Natronomonas moolapensis 8.8.11 complete genomeHesB/IscA family iron-sulfur cluster assembly accessory protein6e-1992.8
NC_010611:3879190:389703538970353897370336Acinetobacter baumannii ACICU, complete genomehypothetical protein8e-1992.4
NC_010410:11201:136801368014015336Acinetobacter baumannii AYE, complete genomeputative chaperone involved in Fe-S cluster assembly and activation (HesB-like)8e-1992.4
NC_014958:66120:674696746967864396Deinococcus maricopensis DSM 21211 chromosome, complete genomeiron-sulfur cluster assembly accessory protein1e-1892
NC_010085:1174917:119326111932611193611351Nitrosopumilus maritimus SCM1, complete genomeiron-sulfur cluster assembly accessory protein2e-1890.9
NC_014479:3079855:309420430942043094566363Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative chaperone involved in Fe-S cluster assembly3e-1890.5
NC_015161:2018493:203259220325922033017426Deinococcus proteolyticus MRP chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-1889.7
NC_012526:2483000:249705424970542497476423Deinococcus deserti VCD115, complete genomeputative Iron-sulfur cluster biosynthesis protein IscA, putative HesB/YadR/YfhF protein family5e-1889.7
NC_011969:4613430:463326646332664633658393Bacillus cereus Q1 chromosome, complete genomehesb/yadr/yfhf family protein1e-1788.2
NC_011658:4672000:469293646929364693289354Bacillus cereus AH187 chromosome, complete genomehesB/yadR/yfhF family protein1e-1788.2
NC_015277:6213304:265226523005354Sphingobacterium sp. 21 chromosome, complete genomeiron-sulfur cluster assembly accessory protein3e-1787.4
NC_019962:2189432:220476322047632205137375Natrinema pellirubrum DSM 15624, complete genomeIron-sulfur cluster assembly accessory protein5e-1786.3
NC_008576:3812500:382752338275233827864342Magnetococcus sp. MC-1, complete genomeiron-sulfur cluster assembly accessory protein9e-1785.5
NC_007984:221030:240709240709241056348Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completeHesB family protein1e-1685.5
NC_013743:1937125:193995719399571940331375Haloterrigena turkmenica DSM 5511, complete genomeiron-sulfur cluster assembly accessory protein2e-1684.3
NC_019974:1689486:169607116960711696445375Natronococcus occultus SP4, complete genomeIron-sulfur cluster assembly accessory protein4e-1683.6
NC_015167:1666000:169275816927581693087330Cellulophaga lytica DSM 7489 chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-1683.2
NC_007413:1570000:158179815817981582136339Anabaena variabilis ATCC 29413, complete genomeHesB/YadR/YfhF8e-1682.4
NC_014248:685656:695087695087695419333Nostoc azollae 0708 chromosome, complete genomeiron-sulfur cluster assembly accessory protein1e-1582
NC_013922:21000:237352373524109375Natrialba magadii ATCC 43099 chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-1581.3
NC_004463:1898648:191906519190651919385321Bradyrhizobium japonicum USDA 110, complete genomeR. etli iscN homolog2e-1580.9
NC_011894:4066926:409218040921804092500321Methylobacterium nodulans ORS 2060, complete genomeiron-sulfur cluster assembly accessory protein3e-1580.5
NC_017154:2901300:292316429231642923487324Yersinia pestis D106004 chromosome, complete genomeiron-sulfur cluster assembly protein3e-1580.5
NC_008150:2599661:262152426215242621847324Yersinia pestis Antiqua, complete genomehypothetical protein3e-1580.5
NC_003272:5184000:519536351953635195701339Nostoc sp. PCC 7120, complete genomehypothetical protein4e-1580.1
NC_015666:2721350:272181427218142722194381Halopiger xanaduensis SH-6 chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-1579.7
NC_008278:7409711:740971174097117410289579Frankia alni ACN14a, complete genomeHypothetical protein in nifB-nifU intergenic region (ORF2)6e-1579.7
NC_019792:3735654:375320337532033753577375Natronobacterium gregoryi SP2 chromosome, complete genomeIron-sulfur cluster assembly accessory protein6e-1579.3
NC_015731:2148517:217175121717512172101351Nitrosomonas sp. Is79A3 chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-1476.6
NC_014963:113015:138363138363138830468Terriglobus saanensis SP1PR4 chromosome, complete genomeiron-sulfur cluster assembly accessory protein6e-1476.3
NC_015656:3300747:331807733180773318673597Frankia symbiont of Datisca glomerata chromosome, complete genomeiron-sulfur cluster assembly accessory protein2e-1374.7
NC_007484:1823751:184504218450421845365324Nitrosococcus oceani ATCC 19707, complete genomeHesB/YadR/YfhF2e-1374.7
NC_010511:2703684:273383127338312734157327Methylobacterium sp. 4-46 chromosome, complete genomeiron-sulfur cluster assembly accessory protein1e-1374.7
NC_019771:2816732:282758028275802828074495Anabaena cylindrica PCC 7122, complete genomeiron-sulfur cluster assembly accessory protein3e-1373.9
NC_013771:684966:704502704502704858357Cyanobacterium UCYN-A, complete genomeIron-sulfur cluster assembly accessory protein3e-1373.6
NC_008786:2687688:268768826876882688011324Verminephrobacter eiseniae EF01-2, complete genomeiron-sulfur cluster assembly protein IscA6e-1372.8
NC_002946:618439:622050622050622370321Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein7e-1372.8
NC_011035:1033942:105015510501551050535381Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeHesB/YadR/YfhF family protein7e-1372.4
NC_017511:950411:965950965950966330381Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeHesB/YadR/YfhF family protein7e-1372.4
NC_017505:1338661:135538113553811355761381Neisseria meningitidis alpha710 chromosome, complete genomeHesB-like protein1e-1272
NC_003116:1488576:150332215033221503642321Neisseria meningitidis Z2491, complete genomeHesB-like protein9e-1372
NC_013016:1257942:127529012752901275610321Neisseria meningitidis alpha14 chromosome, complete genomeHesB/YadR/YfhF family protein9e-1372
NC_017512:1264542:127928812792881279608321Neisseria meningitidis WUE 2594, complete genomeputative IscA-like protein9e-1372
NC_017516:917817:922502922502922822321Neisseria meningitidis H44/76 chromosome, complete genomeiron-sulfur cluster assembly protein IscA9e-1372
NC_017517:1377617:139368013936801394000321Neisseria meningitidis M01-240355 chromosome, complete genomeiron-sulfur cluster assembly protein IscA9e-1372
NC_011726:1605600:161444116144411614770330Cyanothece sp. PCC 8801, complete genomeiron-sulfur cluster assembly accessory protein3e-1270.5
NC_016632:830000:843589843589843954366Serratia symbiotica str. 'Cinara cedri' chromosome, completeFeS assembly scaffold protein4e-1270.1
NC_010162:10208521:102245571022455710225033477Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-1269.7
NC_012559:2752825:276935227693522769675324Laribacter hongkongensis HLHK9, complete genomehypothetical protein6e-1269.3
NC_017056:58000:713437134371675333Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeHESB protein (hesB1)7e-1269.3
NC_017051:58000:713487134871680333Rickettsia prowazekii str. Dachau chromosome, complete genomeHESB protein (hesB1)7e-1269.3
NC_017049:58000:713467134671678333Rickettsia prowazekii str. Chernikova chromosome, complete genomeHESB protein (hesB1)7e-1269.3
NC_017048:400000:413276413276413608333Rickettsia prowazekii str. GvV257 chromosome, complete genomeHESB protein (hesB1)7e-1269.3
NC_008343:1470360:147162314716231472015393Granulibacter bethesdensis CGDNIH1, complete genomehesB protein family9e-1268.9
NC_009937:4122652:413900141390014139429429Azorhizobium caulinodans ORS 571, complete genomeHesB protein2e-1167.4
NC_016929:55974:706147061470946333Rickettsia canadensis str. CA410 chromosome, complete genome2-dehydro-3-deoxyphosphooctonate aldolase2e-1167.4
NC_017058:97810:116300116300116629330Rickettsia australis str. Cutlack chromosome, complete genomeIron-sulfur cluster assembly accessory protein4e-1166.6
NC_016050:73993:908729087291204333Rickettsia japonica YH, complete genomeiron-sulfur cluster assembly accessory protein4e-1166.6
NC_017044:80384:889658896589297333Rickettsia parkeri str. Portsmouth chromosome, complete genomeIron-sulfur cluster assembly accessory protein6e-1166.2
NC_003103:70000:856588565885990333Rickettsia conorii str. Malish 7, complete genomehesB protein7e-1166.2
NC_008260:2142311:214573621457362146095360Alcanivorax borkumensis SK2, complete genomeiron-binding protein IscA9e-1165.5
NC_009720:5079048:509887350988735099298426Xanthobacter autotrophicus Py2, complete genomeiron-sulfur cluster assembly accessory protein9e-1165.5
NC_012730:411526:428607428607428939333Rickettsia peacockii str. Rustic, complete genomeHesB protein family protein9e-1165.5
NC_016913:1066790:108068910806891081021333Rickettsia rickettsii str. Brazil chromosome, complete genomeHesB protein family protein9e-1165.5
NC_009879:57500:698656986570197333Rickettsia canadensis str. McKiel, complete genome2-dehydro-3-deoxyphosphooctonate aldolase9e-1165.5
NC_009900:73804:895228952289854333Rickettsia massiliae MTU5, complete genomeIron-sulfur cluster assembly accessory protein1e-1065.1
NC_016931:107880:114397114397114729333Rickettsia massiliae str. AZT80 chromosome, complete genomeHesB protein family protein2e-1064.7
NC_007493:546000:546042546042546398357Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceProtein of unknown function, HesB/YadR/YfhF2e-1064.3
NC_009881:70807:809668096681298333Rickettsia akari str. Hartford, complete genomeIron-sulfur cluster assembly accessory protein2e-1064.3
NC_010296:54000:760567605676379324Microcystis aeruginosa NIES-843, complete genomehypothetical protein1e-0961.6
NC_015656:3300747:331743433174343318033600Frankia symbiont of Datisca glomerata chromosome, complete genomeiron-sulfur cluster assembly accessory protein3e-0960.5
NC_007797:692944:697239697239697604366Anaplasma phagocytophilum HZ, complete genomeiron-sulfur cluster assembly accessory protein4e-0960.1
NC_016884:2568920:258788025878802588200321Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeHesB/YadR/YfhF-family protein2e-0754.7
NC_014761:1588755:159026815902681590615348Oceanithermus profundus DSM 14977 chromosome, complete genomeiron-sulfur cluster assembly accessory protein5e-0649.7
NC_007354:534865:541851541851542306456Ehrlichia canis str. Jake, complete genomeHesB/YadR/YfhF6e-0649.7