Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1453797 Kineococcus radiotolerans SRS30216, complete genome

Start: 1453797, End: 1455476, Length: 1680

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017275:985516:9895329895329912021671Sulfolobus islandicus HVE10/4 chromosome, complete genomeurease subunit alpha4e-121435
NC_015681:1201926:1205992120599212076951704Thermodesulfatator indicus DSM 15286 chromosome, complete genomeurease subunit alpha2e-119430
NC_012779:1966205:1982413198241319841311719Edwardsiella ictaluri 93-146, complete genomeurease, alpha subunit, putative4e-118425
NC_005810:2739878:2739878273987827415961719Yersinia pestis biovar Microtus str. 91001, complete genomeurease subunit alpha3e-118425
NC_008150:2681327:2681327268132726830451719Yersinia pestis Antiqua, complete genomeurease alpha subunit3e-118425
NC_003143:2992295:2992295299229529940131719Yersinia pestis CO92, complete genomeurease alpha subunit3e-118425
NC_008149:1317109:1317109131710913188271719Yersinia pestis Nepal516, complete genomeurease alpha subunit3e-118425
NC_006155:3456488:3474039347403934757571719Yersinia pseudotuberculosis IP 32953, complete genomeurease alpha subunit3e-118425
NC_010634:3368000:3387696338769633894141719Yersinia pseudotuberculosis PB1/+, complete genomeurease, alpha subunit3e-118425
NC_009381:1783886:1802445180244518041631719Yersinia pestis Pestoides F chromosome, complete genomeurease subunit alpha3e-118425
NC_014029:3047506:3047506304750630492241719Yersinia pestis Z176003 chromosome, complete genomeurease alpha subunit3e-118425
NC_017154:2999841:3017209301720930189271719Yersinia pestis D106004 chromosome, complete genomeurease alpha subunit3e-118425
NC_017168:2751027:2768395276839527701131719Yersinia pestis A1122 chromosome, complete genomeurease subunit alpha3e-118425
NC_017265:3063016:3080384308038430821021719Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,urease alpha subunit3e-118425
NC_012559:978419:1002295100229510040131719Laribacter hongkongensis HLHK9, complete genomeUrease, alpha subunit8e-118424
NC_012988:1777618:1777618177761817793361719Methylobacterium extorquens DM4, complete genomeurease subunit alpha6e-118424
NC_013894:672840:6888976888976906001704Thermocrinis albus DSM 14484 chromosome, complete genomeurease, alpha subunit3e-116419
NC_015435:825853:8241928241928258561665Metallosphaera cuprina Ar-4 chromosome, complete genomeurease subunit alpha7e-116418
NC_007516:2420264:2436939243693924386481710Synechococcus sp. CC9605, complete genomeurease, alpha subunit2e-115416
NC_014006:924417:9443679443679460761710Sphingobium japonicum UT26S chromosome 1, complete genomeurease alpha subunit2e-115416
NC_013008:1307392:1335770133577013374761707Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeurease subunit alpha6e-115415
NC_020075:637420:6469426469426486451704Candidatus Blochmannia chromaiodes str. 640, complete genomeurease subunit alpha6e-115415
NC_003911:1791878:1831078183107818327871710Silicibacter pomeroyi DSS-3, complete genomeurease, alpha subunit4e-115415
NC_012803:361127:3720533720533737681716Micrococcus luteus NCTC 2665, complete genomeurease1e-114414
NC_015172:951550:9617019617019634161716Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeUrease subunit alpha1e-114414
NC_007292:623765:6472736472736489761704Candidatus Blochmannia pennsylvanicus str. BPEN, complete genomeputative urease structural subunit C (alpha)9e-115414
NC_007510:913411:9316939316939333991707Burkholderia sp. 383 chromosome 1, complete sequenceUrease, alpha subunit9e-115414
NC_013406:3329791:3346950334695033486621713Paenibacillus sp. Y412MC10 chromosome, complete genomeurease subunit alpha7e-115414
NC_013209:2536500:2541534254153425432401707Acetobacter pasteurianus IFO 3283-01, complete genomeurease alpha subunit7e-115414
NC_017100:2538461:2542741254274125444471707Acetobacter pasteurianus IFO 3283-03, complete genomeurease alpha subunit7e-115414
NC_017108:2535798:2540078254007825417841707Acetobacter pasteurianus IFO 3283-12, complete genomeurease alpha subunit7e-115414
NC_017111:2535000:2540096254009625418021707Acetobacter pasteurianus IFO 3283-32, complete genomeurease alpha subunit7e-115414
NC_017121:2535803:2540083254008325417891707Acetobacter pasteurianus IFO 3283-07, complete genomeurease alpha subunit7e-115414
NC_017125:2538441:2542721254272125444271707Acetobacter pasteurianus IFO 3283-22, complete genomeurease alpha subunit7e-115414
NC_017146:2538483:2542763254276325444691707Acetobacter pasteurianus IFO 3283-26, complete genomeurease alpha subunit7e-115414
AP010958:3853082:3867452386745238691581707Escherichia coli O103:H2 str. 12009 DNA, complete genomeurease alpha subunit UreC3e-114412
NC_013353:3853082:3867452386745238691581707Escherichia coli O103:H2 str. 12009, complete genomeurease alpha subunit UreC3e-114412
NC_009437:2579161:2614481261448126161931713Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeurease subunit alpha8e-114411
NC_018939:53715:7552775527772361710Helicobacter pylori 26695 chromosome, complete genomeurease subunit beta3e-113409
NC_014560:53750:7611176111778201710Helicobacter pylori SJM180 chromosome, complete genomeurease subunit beta3e-113409
NC_014555:47372:6756967569692781710Helicobacter pylori PeCan4 chromosome, complete genomeurease subunit beta3e-113409
NC_012973:49208:6985069850715591710Helicobacter pylori B38 chromosome, complete genomeurease subunit beta3e-113409
NC_000915:53715:7552775527772361710Helicobacter pylori 26695, complete genomeurease beta subunit (urea amidohydrolase) (ureB)3e-113409
NC_011886:404661:4133244133244150811758Arthrobacter chlorophenolicus A6, complete genomeurease, alpha subunit6e-113408
NC_017192:1063955:1075380107538010770801701Arcobacter sp. L, complete genomeurease alpha subunit6e-113408
NC_004088:1387276:1387276138727613889281653Yersinia pestis KIM, complete genomeurease (urea amidohydrolase) alpha subunit4e-112405
NC_015634:2547144:2547144254714425488531710Bacillus coagulans 2-6 chromosome, complete genomeurease subunit alpha9e-112404
NC_020302:2116468:2124190212419021259051716Corynebacterium halotolerans YIM 70093 = DSM 44683, completeurease subunit alpha2e-111403
NC_014909:589677:5946925946925963951704Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeurease, alpha subunit4e-111402
NC_008343:2389710:2411596241159624133051710Granulibacter bethesdensis CGDNIH1, complete genomeurease alpha subunit2e-110400
NC_004369:1051013:1056198105619810579131716Corynebacterium efficiens YS-314, complete genomeurease alpha subunit2e-110399
NC_008752:3902637:3902637390263739043551719Acidovorax avenae subsp. citrulli AAC00-1, complete genomeurease, alpha subunit8e-110398
NC_017506:2993679:3009796300979630114991704Marinobacter adhaerens HP15 chromosome, complete genomeurease subunit alpha-like protein5e-110398
NC_008686:1180388:1180388118038811820761689Paracoccus denitrificans PD1222 chromosome 1, complete sequenceurease, alpha subunit2e-107390
NC_012704:947409:9499819499819521732193Corynebacterium kroppenstedtii DSM 44385, complete genomeurease, alpha subunit/beta subunit2e-101369
NC_008212:2978786:3000156300015630018681713Haloquadratum walsbyi DSM 16790, complete genomeurease, alpha subunit2e-100366
NC_012988:4292815:4322308432230843240231716Methylobacterium extorquens DM4, complete genomeurease subunit alpha2e-99363
NC_009142:2725000:2734499273449927363251827Saccharopolyspora erythraea NRRL 2338, complete genomeurease alpha subunit7e-95348