Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1452730 Kineococcus radiotolerans SRS30216, complete genome

Start: 1452730, End: 1453773, Length: 1044

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:3038890:3050645305064530517091065Rhodococcus opacus B4, complete genomeputative zinc-containing alcohol dehydrogenase5e-28125
NC_016027:1401500:1402769140276914039321164Gluconacetobacter xylinus NBRC 3288, complete genomezinc-dependent alcohol dehydrogenase7e-27121
NC_011894:5787990:5793717579371757947481032Methylobacterium nodulans ORS 2060, complete genomeAlcohol dehydrogenase GroES domain protein7e-21101
NC_016612:178864:1854651854651865141050Klebsiella oxytoca KCTC 1686 chromosome, complete genomeL-idonate 5-dehydrogenase4e-1995.9
NC_016801:170876:199517199517200488972Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeL-idonate 5-dehydrogenase3e-1892.8
NC_014306:2518996:2524941252494125259841044Erwinia billingiae Eb661, complete genomeL-idonate 5-dehydrogenase6e-1685.5
NC_013956:663295:6846176846176856601044Pantoea ananatis LMG 20103 chromosome, complete genomeIdnD6e-1685.1
NC_008786:3915000:3941232394123239422691038Verminephrobacter eiseniae EF01-2, complete genomeAlcohol dehydrogenase GroES domain protein4e-1479
NC_012125:4716000:4719253471925347202841032Salmonella enterica subsp. enterica serovar Paratyphi C strainL-idonate 5-dehydrogenase2e-1273.9
NC_006905:4638707:4641939464193946429701032Salmonella enterica subsp. enterica serovar Choleraesuis strL-idonate 5-dehydrogenase2e-1273.9
NC_011205:4718239:4720409472040947214401032Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853L-idonate 5-dehydrogenase3e-1273.2
NC_011080:4703266:4706498470649847075291032Salmonella enterica subsp. enterica serovar Newport str. SL254,L-idonate 5-dehydrogenase3e-1273.2
NC_011274:4538722:4540892454089245419231032Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91L-idonate 5-dehydrogenase3e-1273.2
NC_011294:4560902:4563072456307245641031032Salmonella enterica subsp. enterica serovar Enteritidis strL-idonate 5-dehydrogenase3e-1273.2
NC_016831:4517850:4520220452022045212511032Salmonella enterica subsp. enterica serovar Gallinarum/pulloruml-idonate 5-dehydrogenase3e-1273.2
NC_013642:942767:9770539770539780751023Thermotoga naphthophila RKU-10, complete genomeAlcohol dehydrogenase GroES domain protein1e-0861.2
NC_020272:3325000:3327649332764933287101062Bacillus amyloliquefaciens IT-45, complete genomealcohol dehydrogenase GroES domain protein3e-0756.6
NC_015136:1101725:1119669111966911207511083Burkholderia sp. CCGE1001 chromosome 1, complete sequencealcohol dehydrogenase GroES domain-containing protein4e-0755.8
NC_000964:649781:6670146670146680751062Bacillus subtilis subsp. subtilis str. 168, complete genomesorbitol dehydrogenase4e-0755.8
NC_013172:3141739:3162850316285031638871038Brachybacterium faecium DSM 4810, complete genometheronine dehydrogenase-like Zn-dependent dehydrogenase6e-0755.5
NC_014551:605855:6263686263686274291062Bacillus amyloliquefaciens DSM 7, complete genomeglucitol (sorbitol) dehydrogenase5e-0755.5
NC_007168:195638:2111232111232121961074Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein7e-0755.1
NC_014643:2056280:2134745213474521358271083Rothia dentocariosa ATCC 17931 chromosome, complete genome(R,R)-butanediol dehydrogenase1e-0654.7
NC_009959:55567:6606660676581053Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequencealcohol dehydrogenase3e-0653.1
NC_014221:3137952:3151447315144731524751029Truepera radiovictrix DSM 17093 chromosome, complete genomeAlcohol dehydrogenase GroES domain protein5e-0652.4
NC_013508:63914:7912479124801491026Edwardsiella tarda EIB202, complete genomeL-threonine 3-dehydrogenase5e-0652.4