Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1436460 Kineococcus radiotolerans SRS30216, complete genome

Start: 1436460, End: 1437287, Length: 828

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011750:955451:970980970980971768789Escherichia coli IAI39 chromosome, complete genomehydroxyethylthiazole kinase1e-30133
NC_011745:2399313:240373124037312404519789Escherichia coli ED1a chromosome, complete genomehydroxyethylthiazole kinase2e-30132
NC_014500:3519722:352180735218073522601795Dickeya dadantii 3937 chromosome, complete genomehydroxyethylthiazole kinase3e-30132
NC_013592:3397304:340027034002703401064795Dickeya dadantii Ech586, complete genomeHydroxyethylthiazole kinase3e-30132
NC_013421:1397841:141095014109501411744795Pectobacterium wasabiae WPP163, complete genomeHydroxyethylthiazole kinase3e-29129
AC_000091:2185369:218784721878472188635789Escherichia coli W3110 DNA, complete genomehydoxyethylthiazole kinase5e-29128
NC_009800:2225182:222686222268622227650789Escherichia coli HS, complete genomehydroxyethylthiazole kinase5e-29128
NC_000913:2180855:218253521825352183323789Escherichia coli K12, complete genomehydroxyethylthiazole kinase5e-29128
NC_011741:2239637:224405522440552244843789Escherichia coli IAI1 chromosome, complete genomehydroxyethylthiazole kinase6e-29128
CP002185:2347413:235310523531052353893789Escherichia coli W, complete genomehydoxyethylthiazole kinase6e-29128
CU928160:2239637:224405522440552244843789Escherichia coli IAI1 chromosome, complete genomehydoxyethylthiazole kinase6e-29128
NC_010468:1694729:170969617096961710484789Escherichia coli ATCC 8739, complete genomeHydroxyethylthiazole kinase5e-29128
NC_010473:2267851:227354322735432274331789Escherichia coli str. K-12 substr. DH10B, complete genomehydoxyethylthiazole kinase5e-29128
NC_012759:2069326:207501820750182075806789Escherichia coli BW2952 chromosome, complete genomehydroxyethylthiazole kinase5e-29128
NC_009792:642881:655660655660656448789Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-29128
NC_002655:2925787:292826529282652929053789Escherichia coli O157:H7 EDL933, complete genomehydroxyethylthiazole kinase4e-29128
NC_002695:2854629:285804628580462858834789Escherichia coli O157:H7 str. Sakai, complete genomehydroxyethylthiazole kinase4e-29128
NC_011353:2852362:285484028548402855628789Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehydroxyethylthiazole kinase4e-29128
NC_013008:2851342:285382028538202854608789Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehydroxyethylthiazole kinase4e-29128
NC_007384:2251792:225621022562102256998789Shigella sonnei Ss046, complete genomehydoxyethylthiazole kinase6e-29127
NC_016822:2341127:234554523455452346333789Shigella sonnei 53G, complete genomehydroxyethylthiazole kinase6e-29127
NC_003198:2179688:220663122066312207428798Salmonella enterica subsp. enterica serovar Typhi str. CT18,hydroxyethylthiazole kinase4e-28125
NC_011149:2179592:220663822066382207435798Salmonella enterica subsp. enterica serovar Agona str. SL483,hydroxyethylthiazole kinase6e-28124
NC_017328:2225418:223092622309262231714789Shigella flexneri 2002017 chromosome, complete genomehydroxyethylthiazole kinase1e-27123
NC_008258:2190635:219231821923182193106789Shigella flexneri 5 str. 8401, complete genomehydoxyethylthiazole kinase1e-27123
NC_004337:2185282:219003621900362190824789Shigella flexneri 2a str. 301, complete genomehydroxyethylthiazole kinase1e-27123
NC_004741:2169877:217156021715602172348789Shigella flexneri 2a str. 2457T, complete genomehydroxyethylthiazole kinase1e-27123
NC_006905:2235607:226356622635662264363798Salmonella enterica subsp. enterica serovar Choleraesuis strhydroxyethylthiazole kinase1e-27123
NC_015968:3053565:307108330710833071853771Enterobacter asburiae LF7a chromosome, complete genomeHydroxyethylthiazole kinase6e-27121
NC_014121:3483976:349006934900693490839771Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehydroxyethylthiazole kinase2e-26119
NC_011740:2220251:223561922356192236407789Escherichia fergusonii ATCC 35469, complete genomeHydroxyethylthiazole kinase (4-methyl-5-beta-hydroxyethylthiazole kinase) (Thz kinase) (TH kinase)3e-24112
NC_012691:241404:246078246078246881804Tolumonas auensis DSM 9187, complete genomehydroxyethylthiazole kinase8e-24110
NC_013174:1254874:125487412548741255647774Jonesia denitrificans DSM 20603, complete genomeHydroxyethylthiazole kinase2e-23109
NC_012731:3593000:359500135950013595774774Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehydroxyethylthiazole kinase1e-20100
NC_015144:1453500:147132214713221472125804Weeksella virosa DSM 16922 chromosome, complete genomehydroxyethylthiazole kinase3e-2099.4
NC_020911:4428000:444528344452834446071789Octadecabacter antarcticus 307, complete genomehydroxyethylthiazole kinase ThiM3e-2099
NC_012489:4336790:435781743578174358650834Gemmatimonas aurantiaca T-27, complete genomehydroxyethylthiazole kinase6e-2098.2
NC_007644:2099878:210371621037162104519804Moorella thermoacetica ATCC 39073, complete genomehydroxyethylthiazole kinase1e-1583.6
NC_015425:2144639:214821021482102149007798Clostridium botulinum BKT015925 chromosome, complete genomehydroxyethylthiazole kinase5e-1581.6
NC_004193:375416:677948677948678730783Oceanobacillus iheyensis HTE831, complete genomehydroxyethylthiazole kinase2e-1376.6
NC_004193:375416:502076502076502849774Oceanobacillus iheyensis HTE831, complete genomehydroxyethylthiazole kinase1e-1273.9
NC_008593:1917118:192196119219611922758798Clostridium novyi NT, complete genomehydroxyethylthiazole kinase1e-1273.6
NC_016627:4159406:415940641594064160242837Clostridium clariflavum DSM 19732 chromosome, complete genomehydroxyethylthiazole kinase, sugar kinase family2e-1273.2
NC_015732:191554:193190193190194014825Spirochaeta caldaria DSM 7334 chromosome, complete genomeHydroxyethylthiazole kinase2e-1169.7
NC_016027:3038943:304213930421393042972834Gluconacetobacter xylinus NBRC 3288, complete genomehydroxyethylthiazole kinase2e-1066.6
NC_012032:448161:473525473525474334810Chloroflexus sp. Y-400-fl, complete genomeHydroxyethylthiazole kinase1e-0964.3
NC_010175:448020:473383473383474192810Chloroflexus aurantiacus J-10-fl, complete genomeHydroxyethylthiazole kinase1e-0964.3
NC_016628:537137:572147572147572941795Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceHydroxyethylthiazole kinase (4-methyl-5-beta-hydroxyethylthiazole kinase) (Thz kinase) (TH kinase)2e-0963.2
NC_013216:1748241:174905417490541749863810Desulfotomaculum acetoxidans DSM 771, complete genomehydroxyethylthiazole kinase2e-0962.8
NC_014804:401313:420987420987421787801Thermococcus barophilus MP chromosome, complete genomehydroxyethylthiazole kinase7e-0961.2
NC_013517:1249466:125908012590801259910831Sebaldella termitidis ATCC 33386, complete genomehydroxyethylthiazole kinase7e-0961.2
NC_013665:1123943:112314611231461123946801Methanocella paludicola SANAE, complete genomehydroxyethylthiazole kinase9e-0960.8
NC_014364:773500:790246790246791052807Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeHydroxyethylthiazole kinase3e-0756.2
NC_014160:719408:737625737625738449825Thermosphaera aggregans DSM 11486 chromosome, complete genomehydroxyethylthiazole kinase3e-0756.2
NC_015275:3407358:340735834073583408182825Clostridium lentocellum DSM 5427 chromosome, complete genomeHydroxyethylthiazole kinase3e-0755.8
NC_013790:2337000:235152423515242352438915Methanobrevibacter ruminantium M1 chromosome, complete genomehydroxyethylthiazole kinase ThiM8e-0754.3
NC_008525:606986:613850613850614647798Pediococcus pentosaceus ATCC 25745, complete genomeHydroxyethylthiazole kinase, sugar kinase family3e-0652.4