Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1434974 Kineococcus radiotolerans SRS30216, complete genome

Start: 1434974, End: 1435813, Length: 840

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012691:241404:244649244649245449801Tolumonas auensis DSM 9187, complete genomephosphomethylpyrimidine kinase8e-51200
NC_008150:2574794:257969125796912580491801Yersinia pestis Antiqua, complete genomeputative phosphomethylpyrimidine kinase8e-50197
NC_004088:1510467:152310415231041523904801Yersinia pestis KIM, complete genomephosphomethylpyrimidine kinase8e-50197
NC_005810:3021913:302680930268093027609801Yersinia pestis biovar Microtus str. 91001, complete genomephosphomethylpyrimidine kinase8e-50197
NC_003143:3191246:319612331961233196923801Yersinia pestis CO92, complete genomephosphomethylpyrimidine kinase8e-50197
NC_008149:1440371:145302414530241453824801Yersinia pestis Nepal516, complete genomephosphomethylpyrimidine kinase8e-50197
NC_009381:2491427:249632324963232497123801Yersinia pestis Pestoides F chromosome, complete genomephosphomethylpyrimidine kinase8e-50197
NC_014029:3171627:318426431842643185064801Yersinia pestis Z176003 chromosome, complete genomephosphomethylpyrimidine kinase8e-50197
NC_017154:2876545:288136728813672882167801Yersinia pestis D106004 chromosome, complete genomephosphomethylpyrimidine kinase8e-50197
NC_017160:3094768:310923131092313110031801Yersinia pestis D182038 chromosome, complete genomephosphomethylpyrimidine kinase8e-50197
NC_017168:2535732:254060925406092541409801Yersinia pestis A1122 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase8e-50197
NC_013421:1397841:141174114117411412544804Pectobacterium wasabiae WPP163, complete genomephosphomethylpyrimidine kinase1e-49196
NC_009708:1403434:141464314146431415443801Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephosphomethylpyrimidine kinase2e-49196
NC_010465:1427170:145049514504951451295801Yersinia pseudotuberculosis YPIII, complete genomephosphomethylpyrimidine kinase3e-49195
NC_012489:4336790:4356351435635143578321482Gemmatimonas aurantiaca T-27, complete genomethiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase1e-48193
NC_010634:3250810:325717532571753257975801Yersinia pseudotuberculosis PB1/+, complete genomephosphomethylpyrimidine kinase3e-48191
NC_006155:3333303:333969133396913340491801Yersinia pseudotuberculosis IP 32953, complete genomephosphomethylpyrimidine kinase3e-48191
NC_014210:723719:741282741282742085804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,phosphomethylpyrimidine kinase5e-47187
NC_011745:2399313:240293424029342403734801Escherichia coli ED1a chromosome, complete genomephosphomethylpyrimidine kinase2e-46186
NC_010161:2548254:256908825690882569942855Bartonella tribocorum CIP 105476, complete genomephosphomethylpyrimidine kinase4e-46185
NC_010473:2267851:227274622727462273546801Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_000913:2180855:218173821817382182538801Escherichia coli K12, complete genomephosphomethylpyrimidine kinase6e-46184
NC_007384:2251792:225541322554132256213801Shigella sonnei Ss046, complete genomephosphomethylpyrimidine kinase6e-46184
CU928160:2239637:224325822432582244058801Escherichia coli IAI1 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_011750:955451:971765971765972565801Escherichia coli IAI39 chromosome, complete genomephosphomethylpyrimidine kinase7e-46184
NC_009792:642881:656445656445657245801Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein8e-46184
CP002185:2347413:235230823523082353108801Escherichia coli W, complete genomebifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_010468:1694729:171048117104811711281801Escherichia coli ATCC 8739, complete genomephosphomethylpyrimidine kinase6e-46184
NC_009800:2225182:222606522260652226865801Escherichia coli HS, complete genomephosphomethylpyrimidine kinase6e-46184
NC_014500:3519722:352100735210073521810804Dickeya dadantii 3937 chromosome, complete genomebifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase5e-46184
NC_011740:2220251:223482222348222235622801Escherichia fergusonii ATCC 35469, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_016822:2341127:234474823447482345548801Shigella sonnei 53G, complete genomebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_012759:2069326:207422120742212075021801Escherichia coli BW2952 chromosome, complete genomephosphomethylpyrimidine kinase6e-46184
NC_011741:2239637:224325822432582244058801Escherichia coli IAI1 chromosome, complete genomephosphomethylpyrimidine kinase6e-46184
AC_000091:2185369:218705021870502187850801Escherichia coli W3110 DNA, complete genomebifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase6e-46184
NC_014121:3483976:348927234892723490072801Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephosphomethylpyrimidine kinase1e-45183
NC_004337:2185282:218923921892392190039801Shigella flexneri 2a str. 301, complete genomephosphomethylpyrimidine kinase1e-45183
NC_008258:2190635:219152121915212192321801Shigella flexneri 5 str. 8401, complete genomephosphomethylpyrimidine kinase1e-45183
NC_004741:2169877:217076321707632171563801Shigella flexneri 2a str. 2457T, complete genomephosphomethylpyrimidine kinase1e-45183
NC_017328:2225418:223012922301292230929801Shigella flexneri 2002017 chromosome, complete genomePhosphomethylpyrimidine kinase1e-45183
NC_002655:2925787:292746829274682928268801Escherichia coli O157:H7 EDL933, complete genomephosphomethylpyrimidine kinase1e-45183
NC_002695:2854629:285724928572492858049801Escherichia coli O157:H7 str. Sakai, complete genomephosphomethylpyrimidine kinase1e-45183
NC_011353:2852362:285404328540432854843801Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphomethylpyrimidine kinase1e-45183
NC_013008:2851342:285302328530232853823801Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphomethylpyrimidine kinase1e-45183
NC_012108:481657:497063497063497881819Desulfobacterium autotrophicum HRM2, complete genomeputative bifunctional enzyme ThiED (Thiamine-phosphate pyrophosphorylase / Phosphomethylpyrimidine kinase)7e-45181
NC_013592:3397304:339947033994703400273804Dickeya dadantii Ech586, complete genomephosphomethylpyrimidine kinase7e-45181
NC_012731:3593000:359420435942043595004801Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomephosphomethylpyrimidine kinase4e-45181
NC_013457:979102:994942994942995802861Vibrio sp. Ex25 chromosome 2, complete genomephosphomethylpyrimidine kinase7e-44177
NC_006905:2235607:226277922627792263579801Salmonella enterica subsp. enterica serovar Choleraesuis strphosphomethylpyrimidine kinase1e-43177
NC_003198:2179688:220584422058442206644801Salmonella enterica subsp. enterica serovar Typhi str. CT18,phosphomethylpyrimidine kinase1e-43176
NC_011149:2179592:220585122058512206651801Salmonella enterica subsp. enterica serovar Agona str. SL483,phosphomethylpyrimidine kinase1e-43176
NC_015968:3053565:307028630702863071086801Enterobacter asburiae LF7a chromosome, complete genomephosphomethylpyrimidine kinase3e-43175
NC_016628:537137:567998567998568858861Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephosphomethylpyrimidine kinase6e-43174
NC_013517:1249466:125826912582691259087819Sebaldella termitidis ATCC 33386, complete genomephosphomethylpyrimidine kinase6e-43174
NC_015732:191554:192336192336193193858Spirochaeta caldaria DSM 7334 chromosome, complete genomephosphomethylpyrimidine kinase1e-42173
NC_020291:902635:920324920324921148825Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehydroxymethylpyrimidine/phosphomethylpyrimidine kinase ThiD2e-42172
NC_009513:1065704:106570410657041066543840Lactobacillus reuteri F275, complete genomephosphomethylpyrimidine kinase7e-41167
NC_015144:1453500:146986214698621470698837Weeksella virosa DSM 16922 chromosome, complete genomephosphomethylpyrimidine kinase2e-40166
NC_019815:679592:697638697638698471834Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiphosphomethylpyrimidine kinase3e-40165
NC_015425:2144639:214737821473782148181804Clostridium botulinum BKT015925 chromosome, complete genomephosphomethylpyrimidine kinase4e-40165
NC_008593:1917118:192112919211291921932804Clostridium novyi NT, complete genomephosphomethylpyrimidine kinase2e-39162
NC_013174:1254874:1256387125638712579431557Jonesia denitrificans DSM 20603, complete genomephosphomethylpyrimidine kinase9e-39160
NC_014330:1685698:168642716864271687236810Brachyspira pilosicoli 95/1000 chromosome, complete genomephosphomethylpyrimidine kinase1e-38160
NC_012668:2258854:228787222878722288720849Vibrio cholerae MJ-1236 chromosome 1, complete sequencephosphomethylpyrimidine kinase2e-38159
NC_018604:393338:393338393338394147810Brachyspira pilosicoli WesB complete genomephosphomethylpyrimidine kinase2e-38159
NC_018607:2472250:249139824913982492207810Brachyspira pilosicoli B2904 chromosome, complete genomephosphomethylpyrimidine kinase2e-38159
NC_014364:773500:792257792257793105849Spirochaeta smaragdinae DSM 11293 chromosome, complete genomephosphomethylpyrimidine kinase2e-38159
NC_019908:1565500:158353815835381584347810Brachyspira pilosicoli P43/6/78 chromosome, complete genomephosphomethylpyrimidine kinase3e-38158
NC_004193:375416:502878502878503672795Oceanobacillus iheyensis HTE831, complete genomephosphomethylpyrimidine kinase4e-38158
NC_006300:600516:630569630569631378810Mannheimia succiniciproducens MBEL55E, complete genomephosphomethylpyrimidine kinase6e-38157
NC_005945:754517:759271759271760083813Bacillus anthracis str. Sterne, complete genomephosphomethylpyrimidine kinase7e-38157
NC_020911:4428000:444667644466764447482807Octadecabacter antarcticus 307, complete genomephosphomethylpyrimidine kinase2e-37156
NC_014643:2056280:2057459205745920591021644Rothia dentocariosa ATCC 17931 chromosome, complete genomephosphomethylpyrimidine kinase2e-36152
NC_008525:606986:614651614651615466816Pediococcus pentosaceus ATCC 25745, complete genomeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase6e-36151
NC_016048:2907702:293291329329132933722810Oscillibacter valericigenes Sjm18-20, complete genomephosphomethylpyrimidine kinase7e-36150
NC_012032:448161:472050472050472850801Chloroflexus sp. Y-400-fl, complete genomephosphomethylpyrimidine kinase2e-35149
NC_010175:448020:471908471908472708801Chloroflexus aurantiacus J-10-fl, complete genomephosphomethylpyrimidine kinase2e-35149
NC_002578:1333827:133540713354071336198792Thermoplasma acidophilum DSM 1728, complete genomephosphomethylpyrimidine kinase3e-35148
NC_016790:31240:330323303233886855Corynebacterium diphtheriae VA01 chromosome, complete genomemultifunctional thiamine-phosphate pyrophosphorylase5e-35148
NC_000918:1353310:137779513777951378562768Aquifex aeolicus VF5, complete genomeHMP-P kinase1e-34147
NC_014844:2028666:2032446203244620338221377Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephosphomethylpyrimidine kinase5e-34144
NC_016070:743255:7432557432557446071353Thermoproteus tenax Kra 1, complete genomephosphomethylpyrimidine kinase fused to uncharacterized domain2e-33143
NC_003454:249304:253986253986254855870Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHydroxymethylpyrimidine kinase4e-33142
NC_020410:495184:530440530440531258819Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase5e-33141
NC_009725:496443:547847547847548665819Bacillus amyloliquefaciens FZB42, complete genomeputative phosphomethylpyrimidine kinase5e-33141
NC_010376:186510:238995238995239798804Finegoldia magna ATCC 29328, complete genomephosphomethylpyrimidine kinase4e-32138
NC_019896:2805098:282779528277952828610816Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein9e-32137
NC_013517:2413373:241641424164142417223810Sebaldella termitidis ATCC 33386, complete genomephosphomethylpyrimidine kinase9e-32137
NC_013216:1748241:174824117482411749023783Desulfotomaculum acetoxidans DSM 771, complete genomephosphomethylpyrimidine kinase3e-31135
NC_008528:1265542:127215012721501272968819Oenococcus oeni PSU-1, complete genomeHydroxymethylpyrimidine/phosphomethylpyrimidine kinase3e-31135
NC_008278:6279553:629894562989456299820876Frankia alni ACN14a, complete genomebifunctional: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)9e-31134
NC_017954:934616:9536239536239549781356Thermogladius cellulolyticus 1633 chromosome, complete genomephosphomethylpyrimidine kinase5e-31134
NC_003295:112778:112778112778113683906Ralstonia solanacearum GMI1000, complete genomePROBABLE BIFUNCTIONAL PROTEIN: HYDROXY-PHOSPHOMETHYLPYRIMIDINE KINASE AND HYDROXY-METHYLPYRIMIDINE KINASE5e-30131
NC_020409:297258:3186893186893200591371Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhosphomethylpyrimidine kinase8e-30130
NC_014804:401313:4224084224084237571350Thermococcus barophilus MP chromosome, complete genomephosphomethylpyrimidine kinase3e-29129
NC_014507:982000:9997479997471000565819Methanoplanus petrolearius DSM 11571 chromosome, complete genomephosphomethylpyrimidine kinase6e-29127
NC_016023:1501553:150724715072471508065819Bacillus coagulans 36D1 chromosome, complete genomephosphomethylpyrimidine kinase1e-27124
NC_015634:2933712:294926129492612950079819Bacillus coagulans 2-6 chromosome, complete genomephosphomethylpyrimidine kinase2e-27123
NC_013192:519600:522189522189523001813Leptotrichia buccalis DSM 1135, complete genomephosphomethylpyrimidine kinase1e-27123
NC_017316:157254:160854160854161678825Enterococcus faecalis OG1RF chromosome, complete genomephosphomethylpyrimidine kinase6e-27121
NC_004668:191732:195887195887196711825Enterococcus faecalis V583, complete genomephosphomethylpyrimidine kinase, putative6e-27121
NC_008942:815280:828147828147828947801Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-26119
NC_015697:256000:274536274536275351816Lactobacillus reuteri SD2112 chromosome, complete genomephosphomethylpyrimidine kinase4e-26118
NC_014160:719408:739405739405740277873Thermosphaera aggregans DSM 11486 chromosome, complete genomephosphomethylpyrimidine kinase2e-25115
NC_020995:245671:251482251482252312831Enterococcus casseliflavus EC20, complete genomephosphomethylpyrimidine kinase6e-25114
NC_015435:1713051:1720292172029217215031212Metallosphaera cuprina Ar-4 chromosome, complete genomephosphomethylpyrimidine kinase4e-22105
NC_007955:2281070:2291633229163322930031371Methanococcoides burtonii DSM 6242, complete genomePhosphomethylpyrimidine kinase3e-22105
NC_012704:1979183:1997235199723519983801146Corynebacterium kroppenstedtii DSM 44385, complete genomephosphomethylpyrimidine kinase1e-21103
NC_016052:2274427:228780222878022288638837Tetragenococcus halophilus NBRC 12172, complete genomepyridoxal kinase1e-21103
NC_018876:2628966:2657587265758726589391353Methanolobus psychrophilus R15 chromosome, complete genomephosphomethylpyrimidine kinase2e-21102
NC_002977:652481:666613666613667485873Methylococcus capsulatus str. Bath, complete genomephosphomethylpyrimidine kinase, putative5e-21101
NC_015680:369777:3705093705093718641356Pyrococcus yayanosii CH1 chromosome, complete genomephosphomethylpyrimidine kinase6e-21101
NC_011896:363448:379143379143379982840Mycobacterium leprae Br4923, complete genomeputative phosphomethylpyrimidine kinase1e-1997.1
NC_002677:363432:379127379127379966840Mycobacterium leprae TN, complete genomephosphomethylpyrimidine kinase1e-1997.1
NC_014039:1813205:181914918191491819952804Propionibacterium acnes SK137 chromosome, complete genomeputative phosphomethylpyrimidine kinase3e-1995.9
NC_016516:1799521:180798918079891808792804Propionibacterium acnes TypeIA2 P.acn33 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase7e-1994.7
NC_016512:1810625:181653318165331817336804Propionibacterium acnes TypeIA2 P.acn17 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase7e-1994.7
NC_016511:1811171:181707918170791817882804Propionibacterium acnes TypeIA2 P.acn31 chromosome, completebifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase7e-1994.7
NC_006085:1859191:186509918650991866004906Propionibacterium acnes KPA171202, complete genomephosphomethylpyrimidine kinase9e-1994.4
NC_009802:1977596:198045319804531981187735Campylobacter concisus 13826, complete genomephosphomethylpyrimidine kinase superfamily9e-1994
NC_009138:2242470:226103722610372261828792Herminiimonas arsenicoxydans, complete genomebifunctional protein: Includes: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)2e-1893.2
NC_003450:3266604:328739132873913288191801Corynebacterium glutamicum ATCC 13032, complete genomephosphomethylpyrimidine kinase8e-1890.9
NC_020411:215432:256611256611257390780Hydrogenobaculum sp. HO, complete genomePhosphomethylpyrimidine kinase2e-1686.3
NC_015557:215397:256578256578257357780Hydrogenobaculum sp. 3684 chromosome, complete genomePhosphomethylpyrimidine kinase2e-1686.3
NC_015587:215433:256614256614257393780Hydrogenobaculum sp. SHO chromosome, complete genomePhosphomethylpyrimidine kinase2e-1686.3
NC_015638:1824794:185619318561931856972780Lacinutrix sp. 5H-3-7-4 chromosome, complete genomephosphomethylpyrimidine kinase3e-1685.5
NC_015942:3185193:319063331906333191475843Acidithiobacillus ferrivorans SS3 chromosome, complete genomephosphomethylpyrimidine kinase type-12e-1376.6
NC_015760:123929:131430131430132191762Streptococcus salivarius CCHSS3, complete genomephosphomethylpyrimidine kinase5e-1168.6
NC_006448:121435:127439127439128200762Streptococcus thermophilus LMG 18311, complete genomephosphomethylpyrimidine kinase2e-0963.2
NC_006449:121462:127466127466128227762Streptococcus thermophilus CNRZ1066, complete genomephosphomethylpyrimidine kinase2e-0963.2