Pre_GI: BLASTP Hits

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Query: NC_009664:1434974:1434309 Kineococcus radiotolerans SRS30216, complete genome

Start: 1434309, End: 1434977, Length: 669

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013446:4045000:406533940653394066010672Comamonas testosteroni CNB-2, complete genometranscriptional activator, TenA family2e-1582.4
NC_013729:2157785:218263521826352183300666Kribbella flavida DSM 17836, complete genometranscriptional activator, TenA family2e-1375.9
NC_019964:34119:360233602336679657Halovivax ruber XH-70, complete genomeputative transcription activator1e-1066.6
NC_014829:4565467:456480045648004565474675Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional activator, TenA family2e-0859.3
NC_013174:1254874:1256387125638712579431557Jonesia denitrificans DSM 20603, complete genomephosphomethylpyrimidine kinase4e-0858.5
NC_016023:579000:582856582856583626771Bacillus coagulans 36D1 chromosome, complete genomeTenA family transcriptional activator1e-0756.6
NC_015634:652000:673433673433674254822Bacillus coagulans 2-6 chromosome, complete genomeTenA family transcriptional activator3e-0755.5
NC_015144:1453500:146921614692161469878663Weeksella virosa DSM 16922 chromosome, complete genomeTenA family transcriptional regulator6e-0754.3
NC_019896:2805098:283228828322882832998711Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeThiaminase8e-0753.9
NC_014643:2056280:2057459205745920591021644Rothia dentocariosa ATCC 17931 chromosome, complete genomephosphomethylpyrimidine kinase2e-0652.4