Pre_GI: BLASTP Hits

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Query: NC_009664:1195630:1218446 Kineococcus radiotolerans SRS30216, complete genome

Start: 1218446, End: 1219123, Length: 678

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2257166:227095022709502271552603Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator6e-75280
NC_008268:6149576:615238661523866153054669Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, TetR family2e-63242
NC_014218:1663486:166664816666481667313666Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometranscriptional regulator, TetR family7e-49193
NC_012704:652589:6543696543696554061038Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family1e-40166
NC_020126:7661551:768145276814527682090639Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator4e-39160
NC_015578:465814:467379467379467957579Treponema primitia ZAS-2 chromosome, complete genomeTetR family transcriptional regulator5e-1167.8
NC_008699:2916752:293651429365142937146633Nocardioides sp. JS614, complete genomeregulatory protein, TetR2e-1065.9
NC_017186:10070795:100871341008713410087790657Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator3e-0962.4
NC_014318:10070730:100870691008706910087725657Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-0962.4
NC_002939:173833:191349191349191960612Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family8e-0960.5
NC_008010:1:138201382014416597Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, TetR family3e-0858.5
NC_015593:158107:183024183024183683660Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeTetR family transcriptional regulator5e-0858.2
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family5e-0857.8
NC_016582:4934854:495565849556584956545888Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative tetR family transcriptional regulator2e-0756.2
NC_008699:833737:853126853126853728603Nocardioides sp. JS614, complete genomeregulatory protein, TetR2e-0755.8
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator3e-0755.5
NC_013406:3650300:365940836594083660070663Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator3e-0755.5
NC_015580:1328361:132836113283611329092732Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator3e-0755.5
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator3e-0755.5
NC_011894:5056901:507420050742005074796597Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family4e-0755.1
NC_014831:2201246:221887322188732219736864Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family7e-0754.3
NC_014168:2575799:2599232259923226004761245Segniliparus rotundus DSM 44985 chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_011666:1572487:157707315770731577708636Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family8e-0753.9
NC_013715:193647:206119206119206739621Rothia mucilaginosa DY-18, complete genometranscriptional regulator8e-0753.9
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator1e-0653.5
NC_018524:1279156:129739812973981297970573Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative transcriptional regulator1e-0653.5
NC_020126:9938287:994167999416799942269591Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator1e-0653.5
NC_010338:1394550:140932614093261409940615Caulobacter sp. K31, complete genometranscriptional regulator, TetR family1e-0653.5
NC_009338:4869700:489720248972024897861660Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator2e-0653.1
NC_007907:3230513:323385632338563234473618Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0652.8
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family2e-0652.8
NC_016111:3659269:367491836749183675541624Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator4e-0652
NC_014318:8687448:8687448868744886886261179Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_017186:8683964:8687504868750486886821179Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_009338:4869700:489432848943284894990663Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator6e-0651.2
NC_016948:1761020:178541517854151786047633Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein8e-0650.8
NC_016947:2380500:240160224016022402195594Mycobacterium intracellulare MOTT-02 chromosome, complete genomeTetR family transcriptional regulator8e-0650.8
NC_015172:2986867:302742730274273028068642Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family8e-0650.8
NC_009921:5508000:552429255242925524984693Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family8e-0650.8
NC_009485:1487485:150760115076011508173573Bradyrhizobium sp. BTAi1 chromosome, complete genomeTetR family transcriptional regulator9e-0650.4
NC_012724:2443500:246195424619542462622669Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, TetR family protein1e-0550.4