Pre_GI: BLASTP Hits

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Query: NC_009664:1195630:1214306 Kineococcus radiotolerans SRS30216, complete genome

Start: 1214306, End: 1214902, Length: 597

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013715:1750403:176644717664471767034588Rothia mucilaginosa DY-18, complete genomepeptidyl-tRNA hydrolase4e-37154
NC_014643:1577021:157955615795561580140585Rothia dentocariosa ATCC 17931 chromosome, complete genomeaminoacyl-tRNA hydrolase2e-33142
NC_014168:471000:490320490320490880561Segniliparus rotundus DSM 44985 chromosome, complete genomepeptidyl-tRNA hydrolase1e-28125
NC_013947:1363078:137079013707901371431642Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidyl-tRNA hydrolase1e-26119
NC_016111:2257166:226463322646332265220588Streptomyces cattleya NRRL 8057, complete genomePeptidyl-tRNA hydrolase1e-25116
NC_016114:4333390:433669943366994337292594Streptomyces flavogriseus ATCC 33331 chromosome, complete genomepeptidyl-tRNA hydrolase3e-25114
NC_013929:6008072:601160660116066012208603Streptomyces scabiei 87.22 chromosome, complete genomeaminoacyl-tRNA hydrolase1e-23109
NC_004369:1051013:106914710691471069680534Corynebacterium efficiens YS-314, complete genomepeptidyl-tRNA hydrolase2e-2099
NC_015573:162000:178375178375178947573Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomepeptidyl-tRNA hydrolase4e-1581.3
NC_015389:2030154:203514620351462035784639Coriobacterium glomerans PW2 chromosome, complete genomepeptidyl-tRNA hydrolase5e-1580.9
NC_013939:441921:443746443746444324579Deferribacter desulfuricans SSM1, complete genomepeptidyl-tRNA hydrolase PTH1 family1e-1479.3
NC_009850:628024:646247646247646798552Arcobacter butzleri RM4018, complete genomepeptidyl-tRNA hydrolase9e-1476.6
NC_014314:576465:617101617101617667567Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completepeptidyl-tRNA hydrolase1e-1272.8
NC_014483:39729:411494114941709561Paenibacillus polymyxa E681 chromosome, complete genomePeptidyl-tRNA hydrolase (PTH)2e-1168.9
NC_016641:1639356:163963216396321640192561Paenibacillus terrae HPL-003 chromosome, complete genomepeptidyl-tRNA hydrolase3e-1168.6
NC_014323:4792048:479462347946234795201579Herbaspirillum seropedicae SmR1 chromosome, complete genomepeptidyl-tRNA hydrolase7e-1167
NC_015501:556994:563753563753564313561Porphyromonas asaccharolytica DSM 20707 chromosome, completePeptidyl-tRNA hydrolase1e-1066.2
NC_009615:363285:380205380205380768564Parabacteroides distasonis ATCC 8503 chromosome, complete genomepeptidyl-tRNA hydrolase3e-1065.1
NC_012969:2136243:214255721425572143144588Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidyl-tRNA hydrolase3e-1065.1
NC_014733:2095996:210448721044872105074588Methylovorus sp. MP688 chromosome, complete genomepeptidyl-tRNA hydrolase3e-1065.1
NC_015733:864959:877574877574878158585Pseudomonas putida S16 chromosome, complete genomepeptidyl-tRNA hydrolase3e-1064.7
NC_020419:1037899:104571410457141046298585Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completepeptidyl-tRNA hydrolase6e-1063.9
NS_000191:1037899:104571410457141046298585Uncultured Termite group 1 bacterium phylotype Rs-D17, completepeptidyl-tRNA hydrolase6e-1063.9
NC_002937:1634287:165595516559551656560606Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepeptidyl-tRNA hydrolase2e-0962.4
NC_010804:2960352:296388629638862964485600Burkholderia multivorans ATCC 17616 chromosome 1, completePTH1 family peptidyl-tRNA hydrolase7e-0960.5
NC_010084:534937:560288560288560887600Burkholderia multivorans ATCC 17616 chromosome 1, completepeptidyl-tRNA hydrolase7e-0960.5
NC_010995:764567:780594780594781337744Cellvibrio japonicus Ueda107, complete genomepeptidyl-tRNA hydrolase8e-0960.1
NC_012121:139741:153873153873154445573Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein9e-0960.1
NC_009828:469778:482850482850483413564Thermotoga lettingae TMO, complete genomeAminoacyl-tRNA hydrolase1e-0859.7
NC_009922:2850320:287045028704502871007558Alkaliphilus oremlandii OhILAs, complete genomeAminoacyl-tRNA hydrolase2e-0858.9
NC_014624:3538094:354157735415773542188612Eubacterium limosum KIST612 chromosome, complete genomepeptidyl-tRNA hydrolase2e-0858.9
NC_021066:839734:865200865200865784585Raoultella ornithinolytica B6, complete genomepeptidyl-tRNA hydrolase5e-0857.8
NC_015846:24771:383043830438870567Capnocytophaga canimorsus Cc5 chromosome, complete genomepeptidyl-tRNA hydrolase5e-0857.8
NC_004578:1190000:121701112170111217595585Pseudomonas syringae pv. tomato str. DC3000, complete genomepeptidyl-tRNA hydrolase4e-0857.8
NC_016816:2684336:269027726902772690864588Pantoea ananatis LMG 5342, complete genomePeptidyl-tRNA hydrolase6e-0857.4
NC_015663:3586836:360319736031973603781585Enterobacter aerogenes KCTC 2190 chromosome, complete genomepeptidyl-tRNA hydrolase7e-0857.4
NC_015410:1202370:121687712168771217467591Pseudomonas mendocina NK-01 chromosome, complete genomepeptidyl-tRNA hydrolase7e-0857
NC_011283:2103500:212736321273632127947585Klebsiella pneumoniae 342 chromosome, complete genomepeptidyl-tRNA hydrolase8e-0857
NC_009439:1174432:119110611911061191696591Pseudomonas mendocina ymp, complete genomepeptidyl-tRNA hydrolase9e-0856.6
NC_014121:1589389:161032416103241610908585Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepeptidyl-tRNA hydrolase1e-0756.2
NC_010814:2758902:278003927800392780620582Geobacter lovleyi SZ, complete genomeAminoacyl-tRNA hydrolase2e-0755.8
NC_000911:2777447:279742227974222798006585Synechocystis sp. PCC 6803, complete genomepeptidyl-tRNA hydrolase2e-0755.8
NC_017039:2775275:279525027952502795834585Synechocystis sp. PCC 6803 substr. PCC-P, complete genomepeptidyl-tRNA hydrolase2e-0755.8
NC_017052:2775263:279523827952382795822585Synechocystis sp. PCC 6803 substr. PCC-N, complete genomepeptidyl-tRNA hydrolase2e-0755.8
NC_017277:2776264:279623927962392796823585Synechocystis sp. PCC 6803, complete genomepeptidyl-tRNA hydrolase2e-0755.8
NC_014618:2139639:215654921565492157133585Enterobacter cloacae SCF1 chromosome, complete genomepeptidyl-tRNA hydrolase2e-0755.5
NC_016514:2713834:271930027193002719884585Enterobacter cloacae EcWSU1 chromosome, complete genomepeptidyl-tRNA hydrolase3e-0755.1
NC_013222:299683:371635371635372201567Robiginitalea biformata HTCC2501, complete genomepeptidyl-tRNA hydrolase3e-0755.1
NC_016629:2971860:297751729775172978140624Desulfovibrio africanus str. Walvis Bay chromosome, completePeptidyl-tRNA hydrolase5e-0754.3
NC_010170:4196197:422441042244104225042633Bordetella petrii, complete genomepth9e-0753.5
NC_020064:2697116:270482327048232705398576Serratia marcescens FGI94, complete genomepeptidyl-tRNA hydrolase9e-0753.5
NC_014632:11925:171811718117750570Ilyobacter polytropus DSM 2926 chromosome, complete genomepeptidyl-tRNA hydrolase1e-0653.1
NC_013716:1918664:192402619240261924610585Citrobacter rodentium ICC168, complete genomePeptidyl-tRNA hydrolase1e-0653.1
NC_019978:91483:103810103810104367558Halobacteroides halobius DSM 5150, complete genomepeptidyl-tRNA hydrolase2e-0652
NC_012214:2221702:222464022246402225227588Erwinia pyrifoliae Ep1/96, complete genomepeptidyl-tRNA hydrolase4e-0651.6
NC_009697:3753527:376203337620333762602570Clostridium botulinum A str. ATCC 19397 chromosome, completepeptidyl-tRNA hydrolase3e-0651.6
NC_009698:3647955:365914336591433659712570Clostridium botulinum A str. Hall chromosome, complete genomepeptidyl-tRNA hydrolase3e-0651.6
NC_003198:1771432:180269518026951803303609Salmonella enterica subsp. enterica serovar Typhi str. CT18,peptidyl-tRNA hydrolase3e-0651.6
NC_004547:2470978:248745224874522488039588Erwinia carotovora subsp. atroseptica SCRI1043, complete genomepeptidyl-tRNA hydrolase3e-0651.6
NC_010067:1116148:113537111353711135979609Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-0651.2
NC_009633:168266:174900174900175457558Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidyl-tRNA hydrolase4e-0651.2
NC_013971:1660144:170379617037961704383588Erwinia amylovora ATCC 49946 chromosome, complete genomepeptidyl-tRNA hydrolase5e-0650.8
NC_013961:1622616:166626916662691666856588Erwinia amylovora, complete genomePeptidyl-tRNA hydrolase5e-0650.8
NC_010725:2589014:261389126138912614523633Methylobacterium populi BJ001, complete genomeAminoacyl-tRNA hydrolase5e-0650.8
NC_006448:5046:448444845053570Streptococcus thermophilus LMG 18311, complete genomepeptidyl-tRNA hydrolase7e-0650.4
NC_006449:5046:448444845053570Streptococcus thermophilus CNRZ1066, complete genomepeptidyl-tRNA hydrolase7e-0650.4