Pre_GI: BLASTP Hits

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Query: NC_009664:1195630:1206419 Kineococcus radiotolerans SRS30216, complete genome

Start: 1206419, End: 1207690, Length: 1272

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020389:1683120:1695996169599616972671272Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-21104
NC_003901:1947491:1959544195954419608151272Methanosarcina mazei Go1, complete genomeoligosaccharide repeat-containing polymerase3e-21103
NC_018876:2305659:2323801232380123250631263Methanolobus psychrophilus R15 chromosome, complete genomeputative polysaccharide biosynthesis protein2e-1997.1
NC_009464:1479174:1493180149318014944451266Uncultured methanogenic archaeon RC-I, complete genomeputative oligosaccharide repeat unit transporter3e-1893.6
NC_009454:358044:3807523807523820261275Pelotomaculum thermopropionicum SI, complete genomemembrane protein3e-1789.7
NC_015416:1039144:1055853105585310571241272Methanosaeta concilii GP-6 chromosome, complete genomemembrane protein3e-1686.7
NC_009051:2365711:2370011237001123712821272Methanoculleus marisnigri JR1, complete genomepolysaccharide biosynthesis protein4e-1479.7
NC_003413:748906:7695517695517707681218Pyrococcus furiosus DSM 3638, complete genomehypothetical protein5e-1479.3
NC_013665:849508:8885198885198897931275Methanocella paludicola SANAE, complete genomeputative polysaccharide biosynthesis protein4e-1376.3
NC_015865:1108089:1113451111345111146741224Thermococcus sp. 4557 chromosome, complete genomehypothetical protein8e-1272