Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:1195630:1203073 Kineococcus radiotolerans SRS30216, complete genome

Start: 1203073, End: 1204269, Length: 1197

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018581:1180951:1204879120487912059161038Gordonia sp. KTR9 chromosome, complete genomeBeta-xylosidase2e-1790.1
NC_017098:1409086:1409086140908614102731188Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein3e-1686.7
NC_008463:3168837:3170054317005431713821329Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative glycosyl hydrolase3e-1583.6
NC_002516:2436304:2461460246146024627881329Pseudomonas aeruginosa PAO1, complete genomeprobable glycosyl hydrolase3e-1583.6
NC_011831:2410607:2447263244726324490531791Chloroflexus aggregans DSM 9485, complete genomehypothetical protein4e-1066.2
NC_010581:3133547:3146493314649331478061314Beijerinckia indica subsp. indica ATCC 9039, complete genomeglycoside hydrolase family 52e-0964.3
NC_010681:934374:9364389364389381261689Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein2e-0757.8
NC_009720:3968101:3972473397247339739211449Xanthobacter autotrophicus Py2, complete genomehypothetical protein9e-0755.1