Pre_GI: BLASTP Hits

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Query: NC_009664:10718:16925 Kineococcus radiotolerans SRS30216, complete genome

Start: 16925, End: 17515, Length: 591

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-32138
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator4e-24110
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family3e-22104
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family4e-22104
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator7e-22103
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family4e-1890.9
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family4e-1890.9
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator5e-1787.4
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-1685.9
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-1685.5
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator3e-1684.7
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR3e-1581.6
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator8e-1477
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator1e-1376.6
NC_016111:1904859:191737419173741917961588Streptomyces cattleya NRRL 8057, complete genometetR family transcriptional regulator1e-1375.9
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-1374.7
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator8e-1373.6
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator8e-1373.6
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR3e-1271.6
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family5e-1270.9
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family1e-1170.1
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family1e-1169.3
NC_015957:7249873:726786572678657268458594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-1168.9
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR3e-1168.2
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR1e-0963.2
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR7e-0960.5
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator1e-0859.7
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family6e-0857.4
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR7e-0857
NC_017186:5184000:518804051880405188645606Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_014318:5183975:518800651880065188611606Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator2e-0755.8
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator2e-0755.8
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family2e-0755.8
NC_017271:1477323:148206814820681482541474Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator2e-0755.5
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family3e-0651.6
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator8e-0650.4