Pre_GI: BLASTP Hits

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Query: NC_009664:10718:15819 Kineococcus radiotolerans SRS30216, complete genome

Start: 15819, End: 16829, Length: 1011

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:1173794:119584311958431196745903Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-75283
NC_009380:3384737:339809333980933399067975Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein3e-47189
NC_015957:5225903:523676252367625237721960Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein2e-46186
NC_016907:1:103571035711118762Gordonia polyisoprenivorans VH2 plasmid p174, complete sequencehypothetical protein3e-45182