Pre_GI: BLASTP Hits

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Query: NC_009656:5185704:5189313 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 5189313, End: 5189621, Length: 309

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015731:990000:991506991506991835330Nitrosomonas sp. Is79A3 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA1e-23108
NC_012491:5628000:562813256281325628689558Brevibacillus brevis NBRC 100599, complete genomehypothetical protein4e-1786.7
NC_019897:128610:193364193364193918555Thermobacillus composti KWC4 chromosome, complete genomeribosomal subunit interface protein4e-1786.7
NC_005957:4904000:491592349159234916465543Bacillus thuringiensis serovar konkukian str. 97-27, completeribosomal subunit interface protein6e-1786.3
NC_003909:4854379:488419748841974884739543Bacillus cereus ATCC 10987, complete genomeribosomal subunit interface protein6e-1786.3
NC_017200:4995075:503104650310465031588543Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribosomal subunit interface protein6e-1786.3
NC_012472:4908245:493785149378514938393543Bacillus cereus 03BB102, complete genomeribosomal subunit interface protein7e-1785.9
NC_014335:4848389:486075348607534861295543Bacillus cereus biovar anthracis str. CI chromosome, completeribosomal subunit interface protein7e-1785.9
NC_007530:4877500:491126449112644911806543Bacillus anthracis str. 'Ames Ancestor', complete genomeribosomal subunit interface protein7e-1785.9
NC_003997:4876415:491113849111384911680543Bacillus anthracis str. Ames, complete genomeribosomal subunit interface protein7e-1785.9
NC_006274:4940922:497224749722474972789543Bacillus cereus E33L, complete genomeribosomal subunit interface protein7e-1785.9
NC_008600:4898000:492758549275854928127543Bacillus thuringiensis str. Al Hakam, complete genomeribosomal subunit interface protein7e-1785.9
NC_005945:4898841:491247549124754913017543Bacillus anthracis str. Sterne, complete genomeribosomal subunit interface protein7e-1785.9
NC_011773:4940921:497245649724564972998543Bacillus cereus AH820 chromosome, complete genomeribosomal subunit interface protein7e-1785.9
NC_012581:4882525:491358749135874914129543Bacillus anthracis str. CDC 684 chromosome, complete genomeribosomal subunit interface protein7e-1785.9
NC_012659:4877410:491116449111644911706543Bacillus anthracis str. A0248, complete genomeribosomal subunit interface protein7e-1785.9
NC_016779:4864056:489258448925844893126543Bacillus cereus F837/76 chromosome, complete genomeRibosomal subunit interface protein7e-1785.9
NC_017208:5143500:515552651555265156068543Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesigma (54) modulation protein/30S ribosomal protein S307e-1785.9
NC_011658:4925346:493721549372154937757543Bacillus cereus AH187 chromosome, complete genomeribosomal subunit Interface protein7e-1785.9
NC_011969:4841358:487202648720264872568543Bacillus cereus Q1 chromosome, complete genomeribosomal subunit interface protein7e-1785.9
NC_016771:4882886:488953848895384890080543Bacillus cereus NC7401, complete genomeribosomal subunit interface protein7e-1785.9
NC_010184:4909183:494423049442304944772543Bacillus weihenstephanensis KBAB4, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1685.5
NC_011772:5021404:505237050523705052912543Bacillus cereus G9842, complete genomeribosomal subunit interface protein1e-1685.1
NC_011725:5075285:510592451059245106466543Bacillus cereus B4264 chromosome, complete genomeribosomal subunit interface protein1e-1685.1
NC_014171:4959248:499549249954924996034543Bacillus thuringiensis BMB171 chromosome, complete genomesigma (54) modulation protein/SSU ribosomal protein S30P1e-1685.1
NC_014829:3822125:385033638503363850899564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1478.6
NC_013406:6568273:657447565744756575041567Paenibacillus sp. Y412MC10 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1478.2
NC_004193:2553630:255798125579812558538558Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-1477.8
NC_012914:6583000:658813165881316588679549Paenibacillus sp. JDR-2, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-1477
NC_012917:3565268:356632635663263566664339Pectobacterium carotovorum subsp. carotovorum PC1, complete genomesigma 54 modulation protein/ribosomal protein S30EA6e-1475.9
NC_014650:376070:402434402434402985552Geobacillus sp. Y4.1MC1 chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA9e-1475.5
NC_015660:391627:413815413815414366552Geobacillus thermoglucosidasius C56-YS93 chromosome, completesigma 54 modulation protein/30S ribosomal protein S30EA9e-1475.5
NC_014614:2434017:244227024422702442806537Clostridium sticklandii, complete genomeribosomal subunit interface protein9e-1475.5
NC_009437:1481064:149081514908151491363549Caldicellulosiruptor saccharolyticus DSM 8903, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1375.1
NC_021182:4427468:442746844274684428004537Clostridium pasteurianum BC1, complete genomeribosomal subunit interface protein1e-1375.1
NC_010718:2337209:236053523605352361071537Natranaerobius thermophilus JW/NM-WN-LF, complete genomesigma 54 modulation protein, SSU ribosomal protein S30P1e-1375.1
NC_014721:508000:517901517901518446546Caldicellulosiruptor kristjanssonii 177R1B chromosome, completesigma 54 modulation protein/ribosomal protein s30ea2e-1374.7
NC_015949:1957185:197012119701211970666546Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomesigma 54 modulation protein/30S ribosomal protein S30EA2e-1374.7
NC_011149:2701916:272110327211032721441339Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal subunit interface protein2e-1374.7
NC_003198:2703013:272354827235482723886339Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative sigma(54) modulation protein2e-1374.7
NC_011080:2789744:281019328101932810531339Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal subunit interface protein2e-1374.7
NC_006905:2805877:282490528249052825243339Salmonella enterica subsp. enterica serovar Choleraesuis strribosome associated factor, stabilizes ribosomes against dissociation2e-1374.7
NC_013791:1082951:108295110829511083508558Bacillus pseudofirmus OF4 chromosome, complete genomeribosomal protein S30AE familyprotein2e-1374.3
NC_013850:1198134:119954911995491199884336Klebsiella variicola At-22 chromosome, complete genomeribosomal subunit interface protein2e-1373.9
NC_013205:2610956:263378626337862634328543Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,sigma 54 modulation protein/ribosomal protein S30EA3e-1373.9
NC_011296:229494:237083237083237604522Thermodesulfovibrio yellowstonii DSM 11347, complete genomeSSU ribosomal protein S30P9e-1372.4
NC_010001:312500:314508314508315044537Clostridium phytofermentans ISDg, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1272
NC_009648:3192483:321044032104403210769330Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranslation inhibitor protein RaiA1e-1272
NC_009922:2672396:269269126926912693236546Alkaliphilus oremlandii OhILAs, complete genomesigma 54 modulation protein/ribosomal protein S30EA9e-1372
NC_014758:1489761:149427114942711494807537Calditerrivibrio nitroreducens DSM 19672 chromosome, completesigma 54 modulation protein/ribosomal protein s30ea1e-1271.6
CP002516:1196000:119743011974301197771342Escherichia coli KO11, complete genomesigma 54 modulation protein/ribosomal protein S30EA2e-1271.2
CU928160:2785792:280422028042202804561342Escherichia coli IAI1 chromosome, complete genomecold shock protein associated with 30S ribosomal subunit2e-1271.2
CP002185:2889656:290808629080862908427342Escherichia coli W, complete genomecold shock protein associated with 30S ribosomal subunit2e-1271.2
NC_012781:2802000:282365028236502824177528Eubacterium rectale ATCC 33656, complete genomeribosome-associated protein Y (PSrp-1)3e-1270.9
NC_011297:1224749:124530012453001245839540Dictyoglomus thermophilum H-6-12, complete genomeribosomal subunit interface protein6e-1269.3
NC_005125:839000:839102839102839665564Gloeobacter violaceus PCC 7421, complete genomelight-repressed protein LrtA homolog8e-1268.9
NC_011661:1411383:142556914255691426108540Dictyoglomus turgidum DSM 6724, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1168.6
NC_017353:2129738:216823721682372168809573Staphylococcus lugdunensis N920143, complete genomeputative S30EA family ribosomal protein1e-1168.2
NC_014221:38000:434864348644058573Truepera radiovictrix DSM 17093 chromosome, complete genomeribosomal subunit interface protein2e-1168.2
NC_015873:2294312:229882822988282299352525Megasphaera elsdenii DSM 20460, complete genomeribosomal subunit interface protein2e-1168.2
NC_011295:847903:868274868274868846573Coprothermobacter proteolyticus DSM 5265, complete genomeribosomal subunit interface protein4e-1167
NC_013939:1023443:104295810429581043491534Deferribacter desulfuricans SSM1, complete genomesigma 54 modulation protein/ribosomal protein S30EA4e-1166.6
NC_014831:218696:223839223839224402564Thermaerobacter marianensis DSM 12885 chromosome, complete genomeSSU ribosomal protein S30P;sigma 54 modulation protein5e-1166.6
NC_016901:1527877:153977215397721540128357Shewanella baltica OS678 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA5e-1166.2
NC_009052:1394000:140539914053991405755357Shewanella baltica OS155, complete genomesigma 54 modulation protein/ribosomal protein S30EA5e-1166.2
NC_015760:343874:348469348469349017549Streptococcus salivarius CCHSS3, complete genomeribosomal subunit interface protein, 30S ribosomal protein S30AE family6e-1166.2
NC_010814:2275199:231332423133242313869546Geobacter lovleyi SZ, complete genomesigma 54 modulation protein/ribosomal protein S30EA7e-1165.9
NC_009665:1495473:150815715081571508513357Shewanella baltica OS185 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1065.5
NC_017195:3426000:342992234299223430491570Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYvyD1e-1065.5
NC_019896:577594:593422593422593994573Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-1065.5
NC_007350:2019623:202870520287052029277573Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,putative ribosome-associated protein Y2e-1064.3
NC_014632:567289:577373577373577948576Ilyobacter polytropus DSM 2926 chromosome, complete genomeribosomal subunit interface protein3e-1063.9
NC_011184:597496:598790598790599143354Vibrio fischeri MJ11 chromosome I, complete sequenceribosomal subunit interface protein5e-1063.2
NC_015555:693461:695785695785696324540Thermoanaerobacterium xylanolyticum LX-11 chromosome, completesigma 54 modulation protein/ribosomal protein S30EA7e-1062.4
NC_019978:2220863:223713922371392237684546Halobacteroides halobius DSM 5150, complete genomeribosomal subunit interface protein9e-1062.4
NC_010611:679862:694143694143694481339Acinetobacter baumannii ACICU, complete genomeRibosome-associated protein Y (PSrp-1)2e-0961.2
NC_014410:2149886:216831921683192168858540Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,sigma 54 modulation protein/ribosomal protein S30EA2e-0961.2
NC_010410:3166279:317001031700103170363354Acinetobacter baumannii AYE, complete genomeputative sigma(54) modulation protein RpoX2e-0961.2
NC_006449:345396:349955349955350503549Streptococcus thermophilus CNRZ1066, complete genomeribosomal subunit interface protein, ribosomal protein S30AE family2e-0960.8
NC_006448:351998:357421357421357969549Streptococcus thermophilus LMG 18311, complete genomeribosomal subunit interface protein, ribosomal protein S30AE family2e-0960.8
NC_009012:3354477:339837633983763398909534Clostridium thermocellum ATCC 27405, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-0960.5
NC_015601:1107961:114892111489211149463543Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeribosomal protein S30Ae/sigma 54 modulation protein5e-0959.7
NC_008319:571821:574791574791575366576Synechococcus sp. CC9311, complete genomeribosomal subunit interface protein8e-0959.3
NC_016510:2426150:246940824694082469710303Flavobacterium columnare ATCC 49512 chromosome, complete genomehypothetical protein8e-0958.9
NC_016001:905164:912209912209912502294Flavobacterium branchiophilum, complete genomehypothetical protein2e-0857.8
NC_007516:1810834:183341618334161834003588Synechococcus sp. CC9605, complete genomeputative sigma 54 modulation protein/ribosomal protein S30EA3e-0857.4
NC_002937:1706000:171394217139421714481540Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal subunit interface protein1e-0755.5
NC_016629:3496630:349708434970843497617534Desulfovibrio africanus str. Walvis Bay chromosome, completesigma 54 modulation protein/ribosomal protein S30EA3e-0650.8
NC_017079:4550406:455040645504064550975570Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein4e-0650.1
NC_019908:1512622:153080315308031531579777Brachyspira pilosicoli P43/6/78 chromosome, complete genomesigma 54 modulation protein/S30EA ribosomal protein4e-0650.1
NC_015144:734726:753285753285753584300Weeksella virosa DSM 16922 chromosome, complete genomeribosomal subunit interface protein5e-0650.1
NC_012440:373863:386640386640387206567Persephonella marina EX-H1, complete genomesigma 54 modulation protein6e-0649.7
NC_007577:353755:375619375619376203585Prochlorococcus marinus str. MIT 9312, complete genomeputative sigma 54 modulation protein/ribosomal protein S30EA5e-0649.7
NC_014844:1634985:165726016572601657799540Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeribosomal subunit interface protein5e-0649.7
NC_008816:369074:390933390933391517585Prochlorococcus marinus str. AS9601, complete genomelight repressed protein A6e-0649.3
NC_009840:396319:417199417199417783585Prochlorococcus marinus str. MIT 9215, complete genomeRibosome-associated protein Y7e-0649.3
NC_020409:560278:574992574992575531540Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSigma 54 modulation protein/ribosomal protein S30EA9e-0648.9