Pre_GI: BLASTP Hits

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Query: NC_009656:3869281:3888827 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 3888827, End: 3889108, Length: 282

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:1845370:185435218543521854633282Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-43174
NC_008260:2961291:297258129725812972865285Alcanivorax borkumensis SK2, complete genomehypothetical protein6e-29125
NC_017168:2158839:218226621822662182553288Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-22105
NC_004088:1075454:109888110988811099168288Yersinia pestis KIM, complete genomehypothetical protein1e-22105
NC_008149:1002453:102588010258801026167288Yersinia pestis Nepal516, complete genomehypothetical protein1e-22105
NC_004741:310382:336554336554336838285Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-21100
NC_004337:309833:337420337420337704285Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-21100
NC_017328:335160:355284355284355568285Shigella flexneri 2002017 chromosome, complete genomeprotein yaiE3e-21100
NC_009663:2478311:249166024916602491971312Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-1993.6
NC_009850:1011293:101258710125871012901315Arcobacter butzleri RM4018, complete genomeconserved hypothetical protein (DUF1255 domain protein)2e-1787.8
NC_004460:1313468:131799913179991318280282Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein4e-1786.7
NC_007498:1562270:156510415651041565418315Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein3e-1683.6
NC_013173:815696:839002839002839316315Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF12554e-1683.2
NC_018531:2085939:210157321015732101884312Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein1e-1478.2
NC_010676:3009980:304045830404583040778321Burkholderia phytofirmans PsJN chromosome 2, complete sequenceprotein of unknown function DUF12551e-1375.1
NC_007953:1434705:145007614500761450396321Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein4e-1373.6
NC_015422:3513689:355832135583213558638318Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein5e-1269.7
NC_008391:865340:868053868053868373321Burkholderia cepacia AMMD chromosome 2, complete sequenceprotein of unknown function DUF12558e-1268.9
NC_006361:1720031:172327517232751723586312Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-1168.6
NC_010814:2074266:207426620742662074580315Geobacter lovleyi SZ, complete genomeprotein of unknown function DUF12552e-1167.8
NC_017187:691769:711614711614711928315Arcobacter butzleri ED-1, complete genomehypothetical protein3e-1167
NC_011146:3537546:355831135583113558622312Geobacter bemidjiensis Bem, complete genomeprotein of unknown function DUF12557e-1165.9
NC_007298:3271071:327300832730083273319312Dechloromonas aromatica RCB, complete genomeProtein of unknown function DUF12555e-1063.2
NC_008702:2378890:239169723916972392020324Azoarcus sp. BH72, complete genomeconserved hypothetical protein2e-0857.8