Pre_GI: BLASTP Hits

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Query: NC_009656:3127240:3142656 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 3142656, End: 3143531, Length: 876

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:2427120:247785424778542478813960Pseudomonas mendocina ymp, complete genomephage integrase family protein7e-49194
NC_018080:3088866:312118031211803122172993Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein7e-49194
NC_015410:2698572:271550727155072716487981Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein2e-47189
NC_009138:1518315:152966615296661530664999Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (Cointegrate resolution protein S) (partial)3e-46185
NC_008750:2332000:2337459233745923387091251Shewanella sp. W3-18-1, complete genomephage integrase family protein1e-45183
NC_008463:3168837:318711031871103188081972Pseudomonas aeruginosa UCBPP-PA14, complete genomeCointegrate resolution protein S2e-44179
NC_009656:3127240:316451031645103165481972Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrate resolution protein S2e-44179
NC_018080:3088866:309571130957113096682972Pseudomonas aeruginosa DK2 chromosome, complete genomecointegrate resolution protein S2e-44179
NC_013166:1341575:135602813560281356969942Kangiella koreensis DSM 16069, complete genomeintegrase family protein2e-43176
NC_009659:1984980:198761919876191988593975Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S2e-43176
NC_020541:2264521:227697222769722277952981Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC3e-43175
NC_020541:2191600:220585722058572206834978Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC3e-43175
NC_009659:1923925:196707519670751968007933Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S5e-42171
NC_010501:2511887:253435325343532535288936Pseudomonas putida W619, complete genomeintegrase family protein1e-41170
NC_011662:2374955:238053023805302381471942Thauera sp. MZ1T, complete genomeintegrase family protein5e-41168
NC_017986:5867782:586819858681985869166969Pseudomonas putida ND6 chromosome, complete genomecointegrase3e-41168
NC_007508:2756945:2770341277034127716151275Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecointegrate resolution protein S3e-41168
NC_016147:623666:6367486367486380191272Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative phage integrase3e-38158
NC_007507:101887:123354123354124199846Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S1e-30134
NC_013958:29548:341623416235157996Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase domain protein SAM domain protein4e-26118
NC_007507:101887:104425104425105138714Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S1e-22107
NC_011138:3182807:3198680319868031996901011Alteromonas macleodii 'Deep ecotype', complete genomePhage integrase1e-20100
NC_016812:258500:2835232835232845601038Sinorhizobium fredii HH103, complete genomeintegrase family protein8e-2097.8
NC_008573:195317:2039462039462049681023Shewanella sp. ANA-3 plasmid 1, complete sequencephage integrase family protein1e-1997.4
NC_011894:983572:995769995769996758990Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein6e-1994.7
NC_008739:41793:6420664206653481143Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencephage integrase family protein8e-1890.9
NC_013206:21288:386753867539646972Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446integrase family protein3e-1479.3
NC_007677:771168:8244758244758265382064Salinibacter ruber DSM 13855, complete genomePhage integrase, N-terminal SAM-like domain protein5e-1478.6
NC_019012:61360:825028250283473972Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequenceIntegrase/recombinase xerD-like protein7e-1478.2
NC_013732:136673:143650143650144639990Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequenceintegrase family protein9e-1477.8
NC_014032:825793:9156479156479177042058Salinibacter ruber M8 chromosome, complete genometyrosine recombinase XerD4e-1375.5
NC_011887:110618:1319371319371329981062Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeintegrase family protein2e-1273.6
NC_010510:388885:3984003984003994611062Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein6e-1271.6
NC_011758:247666:2655772655772666381062Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeintegrase family protein8e-1064.7
NC_010511:3674178:372811937281193729042924Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein3e-0962.8
NC_010943:2499092:2500946250094625021151170Stenotrophomonas maltophilia K279a, complete genomeputative integrase1e-0860.5
NC_016628:193000:215655215655216623969Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceDNA integration/recombination/inversion protein2e-0860.1
NC_012988:3288253:330339033033903304355966Methylobacterium extorquens DM4, complete genomeintegrase7e-0858.2
NC_008269:577111:5820615820615832601200Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceprobable integrase3e-0755.8
NC_010510:409469:416469416469417404936Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein5e-0755.5
NC_017986:5797044:5815353581535358164681116Pseudomonas putida ND6 chromosome, complete genomephage integrase4e-0755.5
NC_017075:2733898:2742785274278527438431059Rubrivivax gelatinosus IL144, complete genomeintegrase family protein1e-0654.3
NC_007333:1743890:1790694179069417917251032Thermobifida fusca YX, complete genomeputative integrase/recombinase1e-0654.3
NC_006672:47610:4761047610490581449Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceIntegrase-like protein1e-0653.9