Pre_GI: BLASTN Hits

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Query: NC_009654:91096 Marinomonas sp. MWYL1, complete genome

Start: 91096, End: 114388, Length: 23293

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020181:27145592714559275614041582Enterobacter aerogenes EA1509E, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015663:2694373*2694373273418439812Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015497:36148173614817364057525759Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome4e-64254BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004741:36682236682238968922868Shigella flexneri 2a str. 2457T, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004337:36768736768739153023844Shigella flexneri 2a str. 301, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008258:401786*40178642629524510Shigella flexneri 5 str. 8401, complete genome5e-1177.8BLASTN svgBLASTP svg