Pre_GI: BLASTP Hits

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Query: NC_009654:2940278:2942472 Marinomonas sp. MWYL1, complete genome

Start: 2942472, End: 2943083, Length: 612

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015276:2769000:277194627719462772557612Marinomonas mediterranea MMB-1 chromosome, complete genomehelix-turn-helix domain protein1e-100365
NC_014966:795311:815631815631816254624Vibrio vulnificus MO6-24/O chromosome II, complete sequencetranscriptional regulator2e-67254
NC_012667:1045782:106175010617501062373624Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein4e-67253
NC_003910:2588000:260174326017432602339597Colwellia psychrerythraea 34H, complete genomeDNA-binding protein1e-58225
NC_003910:4234000:424542542454254246024600Colwellia psychrerythraea 34H, complete genomeDNA-binding protein5e-58223
NC_008314:1275617:128201212820121282749738Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator1e-21102
NC_007974:1607500:162676616267661627521756Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, XRE family with cupin sensor domain2e-21102
NC_004129:926479:931900931900932529630Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein6e-2097.1
NC_006350:1084930:108965110896511090214564Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative DNA-binding protein1e-1789.7
NC_009659:997779:100550010055001006123624Janthinobacterium sp. Marseille chromosome, complete genomeCro/CI family transcriptional regulator5e-1477.8
NC_014640:5047201:504847650484765049030555Achromobacter xylosoxidans A8 chromosome, complete genomehypothetical protein2e-1375.9
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)3e-1375.1
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor3e-1375.1
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein2e-1272.4
NC_015727:764744:769843769843770589747Cupriavidus necator N-1 plasmid BB1p, complete sequenceCro/CI family transcriptional regulator protein1e-1169.7
NC_020134:1328302:133941313394131339952540Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative DNA-binding protein2e-1169.3
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator7e-1167
NC_013665:918313:937836937836938390555Methanocella paludicola SANAE, complete genomeputative HTH-type transcriptional regulator8e-1167
NC_009515:307800:310577310577311137561Methanobrevibacter smithii ATCC 35061, complete genomexenobiotic response element family DNA binding protein1e-1066.6
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein1e-1066.2
NC_014532:3596097:361884336188433619433591Halomonas elongata DSM 2581, complete genomeprobable transcriptional regulator1e-1066.2
NC_012791:2386000:239303923930392393611573Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family1e-1066.2
NC_014532:2108897:211584221158422116432591Halomonas elongata DSM 2581, complete genomeprobable transcriptional regulator1e-1066.2
NC_014654:2311818:232518923251892325725537Halanaerobium sp. 'sapolanicus' chromosome, complete genomeCupin 2 conserved barrel domain protein3e-1065.1
NC_015500:900807:900807900807901394588Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein2e-0962.4
NC_014118:2417838:242979424297942430366573Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, XRE family2e-0962
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family3e-0961.6
NC_012792:627500:634865634865635437573Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family9e-0960.1
NC_011757:517000:548476548476549072597Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, XRE family1e-0860.1
NC_012791:4794362:481375648137564814277522Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0859.3
NC_004129:2609189:261369426136942614242549Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein2e-0859.3
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator2e-0859.3
NC_011898:1762000:178029717802971780845549Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family2e-0859.3
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein1e-0756.2
NC_014222:799229:801202801202801756555Methanococcus voltae A3 chromosome, complete genometranscriptional regulator, XRE family2e-0756.2
NC_009253:897684:945674945674946330657Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator2e-0755.8
NC_016048:3856665:387693238769323877567636Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein2e-0755.5
NC_020181:1653261:166067016606701661254585Enterobacter aerogenes EA1509E, complete genomeFIG00644802: hypothetical protein4e-0754.7
NC_011144:2770842:278904627890462789666621Phenylobacterium zucineum HLK1, complete genometranscriptional regulator, Cro/CI family6e-0754.3
NC_009706:1972000:199046619904661990768303Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-0753.9
NC_009253:897684:946674946674947330657Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator7e-0753.9
NC_015434:3507059:352202535220253522603579Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator7e-0753.9
NC_003888:7561923:756287275628727563450579Streptomyces coelicolor A3(2), complete genomeDNA-binding protein7e-0753.9
NC_015376:3320818:335258433525843353144561Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, XRE family8e-0753.9
NC_015663:3742738:375698237569823757566585Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator9e-0753.5
NC_012034:2555447:257925725792572579574318Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family1e-0653.1
NC_009253:897684:948103948103948735633Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator1e-0653.1
NC_014652:420457:457158457158457475318Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, xre family1e-0653.1
NC_009614:821247:823492823492824046555Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator4e-0651.2
NC_007907:4859735:487526948752694875916648Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0651.2
NC_013508:1862896:187347118734711874055585Edwardsiella tarda EIB202, complete genomepredicted transcriptional regulator5e-0651.2
NC_009079:2339756:408640864694609Burkholderia mallei NCTC 10247 chromosome I, complete sequenceDNA-binding protein6e-0650.8
NC_006351:3159630:294629463554609Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein6e-0650.8
NC_008835:1483237:149940114994011500009609Burkholderia mallei NCTC 10229 chromosome I, complete sequenceDNA-binding protein6e-0650.8
NC_008784:1151305:116827711682771168885609Burkholderia mallei SAVP1 chromosome I, complete sequenceDNA-binding protein6e-0650.8
NC_006349:2311817:408640864694609Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceDNA-binding protein6e-0650.8
NC_013739:2106662:211189521118952112176282Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family7e-0650.4
NC_007435:1825741:184202518420251842633609Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative DNA-binding protein8e-0650.4
NC_009078:3087759:294829483556609Burkholderia pseudomallei 1106a chromosome II, complete sequenceDNA-binding/cupin domain protein8e-0650.4
NC_009075:3113393:294829483556609Burkholderia pseudomallei 668 chromosome II, complete sequenceDNA-binding protein8e-0650.4
NC_014306:3210311:323155932315593232116558Erwinia billingiae Eb661, complete genomeTranscriptional regulator1e-0550.1