Pre_GI: BLASTN Hits

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Query: NC_009648:5119271 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

Start: 5119271, End: 5157768, Length: 38498

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome08169BLASTN svgBLASTP svg
NC_009792:32259653225965324431718353Citrobacter koseri ATCC BAA-895, complete genome04653BLASTN svgBLASTP svg
NC_015663:2090442*2090442212127330832Enterobacter aerogenes KCTC 2190 chromosome, complete genome03511BLASTN svgBLASTP svg
NC_011748:1408280*1408280143235524076Escherichia coli 55989, complete genome01318BLASTN svgBLASTP svg
CU928145:1408280*1408280143235524076Escherichia coli 55989 chromosome, complete genome01318BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome0783BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome0720BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome0676BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome0660BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-104389BLASTN svgBLASTP svg
NC_013282:551219*55121958904737829Cronobacter turicensis, complete genome4e-102381BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-97365BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str6e-95357BLASTN svgBLASTP svg
NC_010067:3056774*3056774308172024947Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-78301BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome2e-67266BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome6e-64254BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome4e-62248BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome9e-60240BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete9e-60240BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome9e-60240BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome1e-52216BLASTN svgBLASTP svg
NC_009800:4529504*4529504454809918596Escherichia coli HS, complete genome5e-52214BLASTN svgBLASTP svg
CP002185:4750571*4750571477251221942Escherichia coli W, complete genome5e-52214BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome3e-50208BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome3e-50208BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome1e-49206BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-48202BLASTN svgBLASTP svg
NC_004631:4661000*4661000468421223213Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-48202BLASTN svgBLASTP svg
NC_013956:595320*59532063373038411Pantoea ananatis LMG 20103 chromosome, complete genome3e-41178BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome4e-40174BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome4e-40174BLASTN svgBLASTP svg
NC_013421:478586*47858650902930444Pectobacterium wasabiae WPP163, complete genome4e-40174BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome4e-40174BLASTN svgBLASTP svg
NC_014500:443874*44387446959925726Dickeya dadantii 3937 chromosome, complete genome4e-40174BLASTN svgBLASTP svg
NC_020064:521500*52150055828736788Serratia marcescens FGI94, complete genome4e-40174BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome4e-40174BLASTN svgBLASTP svg
NC_015567:547500*54750057779630297Serratia sp. AS9 chromosome, complete genome3e-38168BLASTN svgBLASTP svg
NC_015566:547387*54738757761030224Serratia sp. AS12 chromosome, complete genome3e-38168BLASTN svgBLASTP svg
NC_009832:622969*62296965041627448Serratia proteamaculans 568, complete genome3e-38168BLASTN svgBLASTP svg
NC_013961:441719*44171947879337075Erwinia amylovora, complete genome4e-34155BLASTN svgBLASTP svg
NC_010694:436500*43650046233725838Erwinia tasmaniensis, complete genome2e-33153BLASTN svgBLASTP svg
NC_014562:3985500*3985500400317017671Pantoea vagans C9-1 chromosome, complete genome2e-33153BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome6e-30141BLASTN svgBLASTP svg
NC_013421:13978411397841141728819448Pectobacterium wasabiae WPP163, complete genome2e-29139BLASTN svgBLASTP svg
NC_003198:4513900*4513900454590232003Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-28135BLASTN svgBLASTP svg
NC_015061:4203767*4203767424223938473Rahnella sp. Y9602 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-24123BLASTN svgBLASTP svg
NC_020181:33288443328844335909930256Enterobacter aerogenes EA1509E, complete genome1e-24123BLASTN svgBLASTP svg
NC_013421:3752619*3752619377249719879Pectobacterium wasabiae WPP163, complete genome2e-23119BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-22115BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome1e-21113BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete5e-21111BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome2e-20109BLASTN svgBLASTP svg
NC_013592:956829*95682998781830990Dickeya dadantii Ech586, complete genome3e-19105BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-18101BLASTN svgBLASTP svg
NC_009648:3720000*3720000374226022261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008786:1298817*1298817132410025284Verminephrobacter eiseniae EF01-2, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_014365:28431262843126287814035015Desulfarculus baarsii DSM 2075 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010067:3204682*3204682322388819207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1489.7BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome8e-1487.7BLASTN svgBLASTP svg
NC_009076:35645003564500360973145232Burkholderia pseudomallei 1106a chromosome I, complete sequence3e-1385.7BLASTN svgBLASTP svg
NC_012917:569856*56985658778417929Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012912:4012112*4012112403907126960Dickeya zeae Ech1591, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011750:3545466*3545466356309917634Escherichia coli IAI39 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_012880:3982383*3982383401264230260Dickeya dadantii Ech703, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008782:2326439*2326439236857442136Acidovorax sp. JS42, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014500:1066911*1066911109884731937Dickeya dadantii 3937 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007384:33839833383983340296018978Shigella sonnei Ss046, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0973.8BLASTN svgBLASTP svg
NC_004431:4955658*4955658497950623849Escherichia coli CFT073, complete genome1e-0973.8BLASTN svgBLASTP svg
CU928145:4792703*4792703481092818226Escherichia coli 55989 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011748:4792703*4792703481092818226Escherichia coli 55989, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012917:985617985617100580620190Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006368:32119983211998323023918242Legionella pneumophila str. Paris, complete genome5e-0661.9BLASTN svgBLASTP svg