Pre_GI: BLASTN Hits

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Query: NC_009648:1956070 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

Start: 1956070, End: 1977488, Length: 21419

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013850:26248992624899265699232094Klebsiella variicola At-22 chromosome, complete genome010370BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome04865BLASTN svgBLASTP svg
NC_009648:293052*29305232674733696Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome02345BLASTN svgBLASTP svg
NC_009648:22527572252757228316130405Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome02345BLASTN svgBLASTP svg
NC_009649:16907169074359926693Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,02337BLASTN svgBLASTP svg
AC_000091:1407693*1407693143069823006Escherichia coli W3110 DNA, complete genome02252BLASTN svgBLASTP svg
NC_000913:1404000*1404000142700823009Escherichia coli K12, complete genome02252BLASTN svgBLASTP svg
NC_010473:1493983*1493983151640422422Escherichia coli str. K-12 substr. DH10B, complete genome02244BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome02149BLASTN svgBLASTP svg
NC_010498:22783062278306230147623171Escherichia coli SMS-3-5, complete genome02101BLASTN svgBLASTP svg
NC_011083:1993672*1993672201930525634Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02012BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02004BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome01620BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome01620BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome01620BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome01618BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome01618BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome01618BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome01618BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome01618BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome01618BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome01618BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome01618BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome01618BLASTN svgBLASTP svg
NC_014121:398012*39801242358425573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01616BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome01616BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome01616BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome01606BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome01606BLASTN svgBLASTP svg
NC_011751:3048490*3048490309200343514Escherichia coli UMN026 chromosome, complete genome01600BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome01600BLASTN svgBLASTP svg
NC_011751:50705975070597508906918473Escherichia coli UMN026 chromosome, complete genome01594BLASTN svgBLASTP svg
NC_015968:16188621618862164127522414Enterobacter asburiae LF7a chromosome, complete genome01176BLASTN svgBLASTP svg
NC_007941:11319113195659945281Escherichia coli UTI89 plasmid pUTI89, complete sequence6e-155555BLASTN svgBLASTP svg
NC_013850:3340882*3340882337329232411Klebsiella variicola At-22 chromosome, complete genome2e-136494BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome5e-103383BLASTN svgBLASTP svg
NC_015663:37427383742738376655823821Enterobacter aerogenes KCTC 2190 chromosome, complete genome5e-103383BLASTN svgBLASTP svg
NC_013850:28460692846069288409738029Klebsiella variicola At-22 chromosome, complete genome1e-54222BLASTN svgBLASTP svg
NC_006856:958309583012194026111Salmonella enterica subsp. enterica serovar Choleraesuis str2e-38168BLASTN svgBLASTP svg
NC_007974:11358631135863115837322511Ralstonia metallidurans CH34 chromosome 2, complete sequence2e-38168BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete9e-37163BLASTN svgBLASTP svg
NC_002506:37062937062943982869200Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete9e-37163BLASTN svgBLASTP svg
NC_013850:23576082357608238209924492Klebsiella variicola At-22 chromosome, complete genome9e-37163BLASTN svgBLASTP svg
NC_015663:52532425253242527565022409Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_014840:20572320572326669960977Pantoea sp. At-9b plasmid pPAT9B03, complete sequence1e-29139BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome5e-26127BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome2e-25125BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome2e-25125BLASTN svgBLASTP svg
NC_008463:41337004133700415823024531Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-23119BLASTN svgBLASTP svg
NC_011740:18318451831845185021818374Escherichia fergusonii ATCC 35469, complete genome5e-23117BLASTN svgBLASTP svg
NC_014306:24424712442471247223629766Erwinia billingiae Eb661, complete genome3e-21111BLASTN svgBLASTP svg
NC_015663:44880584488058451433926282Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_011894:7563668*7563668760232338656Methylobacterium nodulans ORS 2060, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013194:16311341631134166791036777Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete3e-1591.7BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012724:20685882068588209611727530Burkholderia glumae BGR1 chromosome 1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008782:28578992857899289359935701Acidovorax sp. JS42, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015563:19513681951368199617644809Delftia sp. Cs1-4 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013592:16022421602242162704324802Dickeya dadantii Ech586, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003296:14199921419992144318623195Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-0971.9BLASTN svgBLASTP svg
NC_002977:92558892558894955323966Methylococcus capsulatus str. Bath, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007507:11000110003059919600Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,4e-0867.9BLASTN svgBLASTP svg
NC_007508:14189114189117036628476Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007508:1446526*1446526147198625461Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007508:38650003865000390220337204Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007508:68904668904671040421359Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008061:18642821864282188910424823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_008825:27614992761499278395922461Methylibium petroleiphilum PM1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010515:67800067800069562617627Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_007086:2408837*2408837243103522199Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007086:15522315522318149426272Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007086:10321071032107105609923993Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003902:42520004252000427283320834Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_003902:39060113906011393272426714Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_003902:1858349*1858349191581657468Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_003902:15562715562718258326957Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_003902:14427051442705146464821944Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_007086:35825003582500360369821199Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007086:46108194610819463110920291Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0765.9BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0765.9BLASTN svgBLASTP svg
NC_010688:673454*67345470601432561Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:32298203229820327221942400Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:30308733030873307137140499Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:20526192052619207639423776Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010717:14699111469911149033920429Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010717:13430001343000136209919100Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007705:15833731583373160836624994Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006834:18494921849492186924719756Xanthomonas oryzae pv. oryzae KACC10331, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006834:16029941602994163009927106Xanthomonas oryzae pv. oryzae KACC10331, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006834:13950013950015810918610Xanthomonas oryzae pv. oryzae KACC10331, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010717:15510001551000159217441175Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010801:50500050500052310518106Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0763.9BLASTN svgBLASTP svg
NC_010801:62934762934765277123425Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0763.9BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0763.9BLASTN svgBLASTP svg
NC_010087:26562526562529159925975Burkholderia multivorans ATCC 17616 chromosome 3, complete6e-0763.9BLASTN svgBLASTP svg
NC_010086:18163781816378188976873391Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-0763.9BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012791:2423466*2423466246659343128Variovorax paradoxus S110 chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010805:57570957570964147565767Burkholderia multivorans ATCC 17616 chromosome 2, complete6e-0763.9BLASTN svgBLASTP svg
NC_010804:67108167108170545734377Burkholderia multivorans ATCC 17616 chromosome 1, complete6e-0763.9BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:30299643029964307745447491Methylobacterium nodulans ORS 2060, complete genome1e-0560BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-0560BLASTN svgBLASTP svg