Pre_GI: BLASTN Hits

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Query: NC_009632:361229 Staphylococcus aureus subsp. aureus JH1 chromosome, complete

Start: 361229, End: 393348, Length: 32120

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: A series of isogenic methicillin-resistant (MRSA) strains were isolated from a patient undergoing vancomycin treatment. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002758:21011372101137212959928463Staphylococcus aureus subsp. aureus Mu50, complete genome02884BLASTN svgBLASTP svg
NC_010079:21028562102856212916726312Staphylococcus aureus subsp. aureus USA300_TCH1516, complete02813BLASTN svgBLASTP svg
NC_002745:20187612018761203681818058Staphylococcus aureus subsp. aureus N315, complete genome01998BLASTN svgBLASTP svg
NC_002951:35102935102938944738419Staphylococcus aureus subsp. aureus COL, complete genome01671BLASTN svgBLASTP svg
NC_002758:91882791882794103822212Staphylococcus aureus subsp. aureus Mu50, complete genome01481BLASTN svgBLASTP svg
NC_009782:92027292027295475434483Staphylococcus aureus subsp. aureus Mu3, complete genome01481BLASTN svgBLASTP svg
NC_002952:21257502125750215605630307Staphylococcus aureus subsp. aureus MRSA252, complete genome01094BLASTN svgBLASTP svg
NC_007622:1842000*1842000189289150892Staphylococcus aureus RF122, complete genome01035BLASTN svgBLASTP svg
NC_010079:15643271564327160887644550Staphylococcus aureus subsp. aureus USA300_TCH1516, complete0997BLASTN svgBLASTP svg
NC_007793:15744561574456159486920414Staphylococcus aureus subsp. aureus USA300, complete genome0997BLASTN svgBLASTP svg
NC_007795:19220001922000197572353724Staphylococcus aureus subsp. aureus NCTC 8325, complete genome0904BLASTN svgBLASTP svg
NC_007795:20340002034000206399930000Staphylococcus aureus subsp. aureus NCTC 8325, complete genome0751BLASTN svgBLASTP svg
NC_007793:20868962086896211336426469Staphylococcus aureus subsp. aureus USA300, complete genome0686BLASTN svgBLASTP svg
NC_014925:57875957875960460625848Staphylococcus pseudintermedius HKU10-03 chromosome, complete2e-88335BLASTN svgBLASTP svg
NC_007168:23498942349894237983629943Staphylococcus haemolyticus JCSC1435, complete genome3e-68268BLASTN svgBLASTP svg
NC_002952:15920001592000162211730118Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-51212BLASTN svgBLASTP svg
NC_009782:20918152091815211324121427Staphylococcus aureus subsp. aureus Mu3, complete genome3e-50208BLASTN svgBLASTP svg
NC_007168:18393821839382185725517874Staphylococcus haemolyticus JCSC1435, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015558:13893691389369142083031462Streptococcus parauberis KCTC 11537 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012121:47414447414450609331950Staphylococcus carnosus subsp. carnosus TM300, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004116:56089356089358271221820Streptococcus agalactiae 2603V/R, complete genome6e-0867.9BLASTN svgBLASTP svg