Pre_GI: BLASTP Hits

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Query: NC_009621:389181:400856 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence

Start: 400856, End: 404011, Length: 3156

Host Lineage: Sinorhizobium medicae; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing soil bacterium. This species was isolated from Medicago truncatula, where it forms nitrogen-fixing root nodules. Effective nitrogen fixing, aerobic microsymbiont of a diverse range of annual Medicago (medic) species. Has saprophytic competence and acid tolerance properties. Isolated in 1981 from a nodule recovered from the roots of an annual medic (Medicago murex) growing south of Tempio in Sardinia.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015508:296856:3134503134503166353186Agrobacterium sp. H13-3 chromosome linear, complete sequenceexodeoxyribonuclease V subunit beta0677
NC_021171:2562000:2569926256992625731923267Bacillus sp. 1NLA3E, complete genomeUvrD/REP helicase5e-38160
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase5e-31137
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase7e-20100
NC_011969:1181302:1191830119183011955553726Bacillus cereus Q1 chromosome, complete genomeATP-dependent nuclease, subunit a8e-1893.6
NC_003909:1244000:1254852125485212585773726Bacillus cereus ATCC 10987, complete genomeATP-dependent nuclease, subunit A1e-1792.8
NC_012659:1103737:1115551111555111192763726Bacillus anthracis str. A0248, complete genomeATP-dependent nuclease, subunit A1e-1792.8
NC_005945:1103729:1115543111554311192683726Bacillus anthracis str. Sterne, complete genomeATP-dependent nuclease, subunit A1e-1792.8
NC_014335:1094000:1105302110530211090273726Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent nuclease subunit A2e-1792
NC_014171:1118000:1128345112834511320703726Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent nuclease subunit A3e-1791.3
NC_004722:1108649:1120491112049111242163726Bacillus cereus ATCC 14579, complete genomeATP-dependent nuclease subunit A3e-1791.3
NC_014729:1185294:1198980119898012024383459Halogeometricum borinquense DSM 11551 chromosome, complete genomeATP-dependent exonuclase v subunit beta, helicase and exonuclease domain-containing6e-1790.5
NC_020388:1869000:1872073187207318755343462Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase1e-1689.7
NC_011725:1150779:1162548116254811662733726Bacillus cereus B4264 chromosome, complete genomeATP-dependent nuclease subunit A1e-1689.4
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II5e-1584
NC_010184:1114000:1121749112174911254743726Bacillus weihenstephanensis KBAB4, complete genomeRecombination helicase AddA7e-1583.6
NC_015738:978794:1043373104337310470443672Eggerthella sp. YY7918, complete genomeATP-dependent exoDNAse exonuclease V subunit beta2e-1482.4
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase6e-1480.5
NC_011772:1094534:1106450110645011101753726Bacillus cereus G9842, complete genomeATP-dependent nuclease, subunit A1e-1379.7
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase1e-1379.7
NC_017208:1147230:1159040115904011627653726Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent nuclease subunit A9e-1376.6
NC_008262:2433979:2461165246116524634202256Clostridium perfringens SM101, complete genomeATP-dependent DNA helicase PcrA2e-1275.5
NC_010725:3315007:3335885333588533390283144Methylobacterium populi BJ001, complete genomeUvrD/REP helicase2e-1275.1
NC_013851:3478153:3489678348967834935323855Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, beta subunit3e-1275.1
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase5e-1274.3
NC_018419:226000:2279972279972301502154Secondary endosymbiont of Ctenarytaina eucalypti chromosome,ATP-dependent DNA helicase UvrD1e-1173.2
NC_020209:4549563:4571685457168545736942010Pseudomonas poae RE*1-1-14, complete genomeATP-dependent DNA helicase Rep1e-1173.2
NC_014720:4170:2938329383316532271Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuvrd/rep helicase1e-1172.8
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase2e-1172
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase3e-1171.6
NC_010003:795355:8349168349168370362121Petrotoga mobilis SJ95, complete genomeUvrD/REP helicase4e-1171.2
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase4e-1171.2
NC_014829:443500:4665374665374688192283Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATP-dependent DNA helicase PcrA4e-1171.2
NC_013665:918313:9634339634339666963264Methanocella paludicola SANAE, complete genomeputative ATP-dependent DNA helicase5e-1170.9
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA1e-1069.3
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase2e-1068.6
NC_010655:1160384:1160384116038411623902007Akkermansia muciniphila ATCC BAA-835, complete genomeUvrD/REP helicase3e-1068.2
NC_003228:2973266:2979834297983429821942361Bacteroides fragilis NCTC 9343, complete genomeputative helicase4e-1067.8
NC_016776:2956444:2997159299715929995192361Bacteroides fragilis 638R, complete genomeputative helicase4e-1067.8
NC_007963:3553678:3568340356834035703882049Chromohalobacter salexigens DSM 3043, complete genomeATP-dependent DNA helicase Rep5e-1067.4
NC_018868:2867500:2882650288265028846712022Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeATP-dependent DNA helicase Rep5e-1067.4
NC_007519:3527207:3527207352720735293662160Desulfovibrio alaskensis G20 chromosome, complete genomeATP-dependent DNA helicase UvrD5e-1067.4
NC_006347:2899653:2906221290622129085812361Bacteroides fragilis YCH46, complete genomeATP-dependent DNA helicase6e-1067.4
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA9e-1066.6
NC_014550:615609:6289646289646313422379Arthrobacter arilaitensis Re117, complete genomeATP-dependent DNA helicase PcrA1e-0966.2
NC_013410:2179342:2189179218917921924633285Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UvrD/REP helicase1e-0965.9
NC_004459:1794540:1790923179092317945433621Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse beta subunit2e-0965.9
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase2e-0965.5
NC_008767:1363288:1380391138039113824632073Neisseria meningitidis FAM18, complete genomeATP-dependent DNA helicase2e-0965.1
NC_014924:3065430:3065430306543030676102181Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA helicase II4e-0964.7
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase3e-0964.7
NC_011035:933269:9352999352999373142016Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative ATP-dependent DNA helicase3e-0964.7
NC_017511:852260:8522608522608542752016Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative ATP-dependent DNA helicase3e-0964.7
NC_019896:2805098:2819463281946328217422280Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-0964.3
NC_017347:2017097:2027227202722720294192193Staphylococcus aureus subsp. aureus T0131 chromosome, completeATP-dependent DNA helicase, PcrA5e-0964.3
NC_015977:2807782:2831058283105828339462889Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I helicase domain and RecB family exonuclease domain containing protein5e-0963.9
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II5e-0963.9
NC_014098:2225174:2258626225862622608482223Bacillus tusciae DSM 2912 chromosome, complete genomeUvrD/REP helicase6e-0963.9
NC_020829:5382500:5399636539963654016452010Pseudomonas denitrificans ATCC 13867, complete genomeATP-dependent DNA helicase Rep6e-0963.9
NC_014752:197000:2004822004822026892208Neisseria lactamica ST-640, complete genomeDNA helicase II9e-0963.5
NC_010718:3039434:3039434303943430416982265Natranaerobius thermophilus JW/NM-WN-LF, complete genomeUvrD/REP helicase9e-0963.5
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA9e-0963.2
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase9e-0963.2
NC_008570:236500:2417872417872439582172Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA helicase II1e-0863.2
NC_018080:6048516:6099658609965861016672010Pseudomonas aeruginosa DK2 chromosome, complete genomeATP-dependent DNA helicase Rep2e-0862.8
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II2e-0862.4
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II2e-0862.4
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II2e-0862.4
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II2e-0862.4
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase2e-0862.4
NC_013093:915248:9333579333579374064050Actinosynnema mirum DSM 43827, complete genomeUvrD/REP helicase2e-0862.4
NC_015660:3328595:3343779334377933455871809Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUvrD/REP helicase3e-0862
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD3e-0862
NC_002488:45219:4680546805489912187Xylella fastidiosa 9a5c, complete genomeDNA helicase II3e-0862
NC_009488:1871912:1899064189906419012142151Orientia tsutsugamushi str. Boryong, complete genomeDNA helicase II, CAI276902e-0862
NC_011901:625712:6616286616286636432016Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent DNA helicase Rep3e-0861.6
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA5e-0861.2
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA4e-0861.2
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase4e-0861.2
NC_010682:3313944:3326681332668133283541674Ralstonia pickettii 12J chromosome 1, complete sequenceUvrD/REP helicase4e-0861.2
NC_007912:231817:2322972322972343152019Saccharophagus degradans 2-40, complete genomeATP-dependent DNA helicase Rep5e-0860.8
NC_009481:1365000:1381620138162013853093690Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit beta6e-0860.8
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase7e-0860.5
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II7e-0860.5
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase7e-0860.5
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA6e-0860.5
NC_007929:1397989:1403083140308314053172235Lactobacillus salivarius subsp. salivarius UCC118, complete genomeATP-dependent DNA helicase9e-0860.1
NC_010513:44886:4643546435486062172Xylella fastidiosa M12 chromosome, complete genomeDNA-dependent helicase II9e-0860.1
NC_009615:1067603:1087220108722010895622343Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase1e-0759.7
NC_006672:6000:2014120141221892049Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceDNA helicase II UvrD1e-0759.3
NC_014614:656000:6578816578816600432163Clostridium sticklandii, complete genomeATP-dependent DNA helicase1e-0759.3
NC_008253:2965573:2983115298311529866573543Escherichia coli 536, complete genomeexodeoxyribonuclease V beta chain2e-0758.9
NC_014970:928240:9282409282409301591920Mycoplasma haemofelis str. Langford 1, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-0758.9
NC_011745:3197584:3215233321523332187753543Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit beta2e-0758.9
NC_007613:2699500:2715195271519527187373543Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit2e-0758.9
NC_021171:358456:3625633625633647762214Bacillus sp. 1NLA3E, complete genomeATP-dependent DNA helicase2e-0758.9
NC_013361:3823347:3840997384099738445393543Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit beta2e-0758.9
NC_015696:610000:6267886267886290162229Francisella sp. TX077308 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA2e-0758.9
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)3e-0758.5
NC_010498:3023442:3041092304109230446043513Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, beta subunit3e-0758.5
NC_009483:1551040:1564229156422915662652037Geobacter uraniireducens Rf4 chromosome, complete genomeUvrD/REP helicase2e-0758.5
NC_008781:330919:3478083478083499372130Polaromonas naphthalenivorans CJ2, complete genomeUvrD/REP helicase3e-0758.2
NC_014974:1539950:1545650154565015475151866Thermus scotoductus SA-01 chromosome, complete genomeATP-dependent DNA helicase PcrA3e-0758.2
NC_014483:3498395:3506660350666035106794020Paenibacillus polymyxa E681 chromosome, complete genomeATP-dependent nuclease subunit A4e-0757.8
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase4e-0757.8
NC_012668:442601:4725634725634745782016Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase Rep5e-0757.8
NC_011742:3057444:3074776307477630783183543Escherichia coli S88 chromosome, complete genomeexonuclease V subunit beta6e-0757.4
NC_007946:3125577:3142897314289731464483552Escherichia coli UTI89, complete genomeexodeoxyribonuclease V beta chain6e-0757.4
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA6e-0757.4
NC_019942:1078837:1093005109300510957792775Aciduliprofundum sp. MAR08-339, complete genomeDNA/RNA helicase, superfamily I6e-0757.4
NC_018515:3169973:3177608317760831798482241Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent DNA helicase PcrA7e-0757
NC_007974:2048000:2081873208187320836481776Ralstonia metallidurans CH34 chromosome 2, complete sequenceSuperfamily I DNA and RNA helicases-like protein7e-0757
NC_007644:2099878:2099878209987821020672190Moorella thermoacetica ATCC 39073, complete genomeATP-dependent DNA helicase PcrA7e-0757
NC_014363:1680578:1680578168057816832172640Olsenella uli DSM 7084 chromosome, complete genomeUvrD/REP helicase7e-0757
NC_014622:3819495:3827329382732938313484020Paenibacillus polymyxa SC2 chromosome, complete genomerecombination helicase adda9e-0757
NC_002488:2546495:2556133255613325581752043Xylella fastidiosa 9a5c, complete genomeATP-dependent DNA helicase1e-0656.6
NC_003919:5056650:5056650505665050586261977Xanthomonas axonopodis pv. citri str. 306, complete genomeATP-dependent DNA helicase1e-0656.6
NC_010634:166900:1881581881581901792022Yersinia pseudotuberculosis PB1/+, complete genomeATP-dependent DNA helicase Rep1e-0656.2
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase1e-0656.2
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase1e-0656.2
NC_006155:172313:1935641935641955852022Yersinia pseudotuberculosis IP 32953, complete genomeATP-dependent DNA helicase Rep1e-0656.2
NC_009952:3596399:3620154362015436235313378Dinoroseobacter shibae DFL 12, complete genomedouble-strand break repair helicase AddA2e-0655.8
NC_014311:3076519:3093373309337330950101638Ralstonia solanacearum PSI07 chromosome, complete genomeATP-dependent DNA helicase Rep2e-0655.8
NC_010545:619346:6399726399726430403069Corynebacterium urealyticum DSM 7109, complete genomeputative ATP-dependent DNA helicase II2e-0655.8
NC_013731:11605:4345543455463552901Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequenceUvrD/REP helicase1e-0655.8
NC_008752:2056547:2074331207433120767872457Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase2e-0655.5
NC_013204:1135397:1155067115506711575082442Eggerthella lenta DSM 2243, complete genomeUvrD/REP helicase2e-0655.5
NC_018720:1186058:1186058118605811885712514Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP-dependent DNA helicase PcrA6e-0653.9
NC_010981:1053533:1058198105819810601111914Wolbachia pipientis, complete genomehelicase II, UvrD6e-0653.9
NC_012416:979484:9824839824839843991917Wolbachia sp. wRi, complete genomeDNA helicase II8e-0653.5
NC_002978:918000:9223779223779242931917Wolbachia endosymbiont of Drosophila melanogaster, complete genomehelicase II - UvrD/PcrA9e-0653.5