Pre_GI: BLASTN Hits

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Query: NC_009617:4946000 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 4946000, End: 4972029, Length: 26030

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_019896:57759457759460106123468Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_014652:10916101091610111461223003Caldicellulosiruptor hydrothermalis 108 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_015913:62485962485964365018792Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_016012:56168756168758109919413Candidatus Arthromitus sp. SFB-rat-Yit, complete genome6e-26127BLASTN svgBLASTP svg
NC_018664:23900023900026409925100Clostridium acidurici 9a chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012563:30909543090954312052229569Clostridium botulinum A2 str. Kyoto, complete genome7e-38167BLASTN svgBLASTP svg
NC_010520:29379812937981296593527955Clostridium botulinum A3 str. Loch Maree, complete genome7e-38167BLASTN svgBLASTP svg
NC_010674:82819182819184720219012Clostridium botulinum B str. Eklund 17B, complete genome1e-20109BLASTN svgBLASTP svg
NC_010516:29000572900057292557925523Clostridium botulinum B1 str. Okra, complete genome7e-38167BLASTN svgBLASTP svg
NC_010723:80121580121582512923915Clostridium botulinum E3 str. Alaska E43, complete genome7e-41176BLASTN svgBLASTP svg
NC_014328:10469581046958106876321806Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_008593:10605481060548108560225055Clostridium novyi NT, complete genome3e-52214BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome2e-23119BLASTN svgBLASTP svg
NC_008261:2157713*2157713217590318191Clostridium perfringens ATCC 13124, complete genome2e-19105BLASTN svgBLASTP svg
NC_020291:49448354944835500759962765Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome01124BLASTN svgBLASTP svg
NC_020291:4903981*4903981494131537335Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020291:6055282*6055282607394118660Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:18269771826977184565818682Clostridium tetani E88, complete genome7e-41176BLASTN svgBLASTP svg
NC_009012:57414557414559944025296Clostridium thermocellum ATCC 27405, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012778:26324126324129536232122Eubacterium eligens ATCC 27750, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_016011:67841967841969889020472Listeria ivanovii subsp. ivanovii PAM 55, complete genome8e-1383.8BLASTN svgBLASTP svg