Pre_GI: BLASTN Hits

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Query: NC_009617:385000 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 385000, End: 403099, Length: 18100

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020291:49100049100051106420065Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome04990BLASTN svgBLASTP svg
NC_010674:37062937062939810727479Clostridium botulinum B str. Eklund 17B, complete genome02952BLASTN svgBLASTP svg
NC_020291:22914182291418231430022883Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome02932BLASTN svgBLASTP svg
NC_010723:37174137174139352221782Clostridium botulinum E3 str. Alaska E43, complete genome02882BLASTN svgBLASTP svg
NC_008262:24980002498000252144223443Clostridium perfringens SM101, complete genome01166BLASTN svgBLASTP svg
NC_004557:25524182552418257431921902Clostridium tetani E88, complete genome0706BLASTN svgBLASTP svg
NC_008593:21367592136759215512718369Clostridium novyi NT, complete genome0666BLASTN svgBLASTP svg
NC_012563:37298173729817376659036774Clostridium botulinum A2 str. Kyoto, complete genome3e-178632BLASTN svgBLASTP svg
NC_010520:35800003580000360470824709Clostridium botulinum A3 str. Loch Maree, complete genome6e-161575BLASTN svgBLASTP svg
NC_014393:36509573650957366964218686Clostridium cellulovorans 743B chromosome, complete genome2e-126460BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome3e-107396BLASTN svgBLASTP svg
NC_010516:35450173545017356809923083Clostridium botulinum B1 str. Okra, complete genome4e-100373BLASTN svgBLASTP svg
NC_008593:22818962281896230590024005Clostridium novyi NT, complete genome6e-90339BLASTN svgBLASTP svg
NC_015275:3594890*3594890363588740998Clostridium lentocellum DSM 5427 chromosome, complete genome9e-46192BLASTN svgBLASTP svg
NC_011898:426951*42695146616239212Clostridium cellulolyticum H10, complete genome5e-32147BLASTN svgBLASTP svg
NC_020164:88751088751091047422965Staphylococcus warneri SG1, complete genome2e-31145BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome1e-29139BLASTN svgBLASTP svg
NC_010718:46440546440548434419940Natranaerobius thermophilus JW/NM-WN-LF, complete genome4e-26127BLASTN svgBLASTP svg
NC_010516:34660003466000348809922100Clostridium botulinum B1 str. Okra, complete genome2e-25125BLASTN svgBLASTP svg
NC_019978:31534631534633383318488Halobacteroides halobius DSM 5150, complete genome1e-20109BLASTN svgBLASTP svg
NC_015958:677500*67750069545217953Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome4e-20107BLASTN svgBLASTP svg
NC_015949:2002752*2002752202359920848Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome2e-18101BLASTN svgBLASTP svg
NC_003366:12878312878314709918317Clostridium perfringens str. 13, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_012225:21989872198987222132922343Brachyspira hyodysenteriae WA1, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_012563:24660002466000248852922530Clostridium botulinum A2 str. Kyoto, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome9e-1589.7BLASTN svgBLASTP svg
NC_010516:23740002374000239681422815Clostridium botulinum B1 str. Okra, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_014330:1113145*1113145114959936455Brachyspira pilosicoli 95/1000 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_014652:666227*66622768697120745Caldicellulosiruptor hydrothermalis 108 chromosome, complete1e-1385.7BLASTN svgBLASTP svg
NC_018607:290500*29050033195841459Brachyspira pilosicoli B2904 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_018604:2579000*2579000263363754638Brachyspira pilosicoli WesB complete genome1e-1385.7BLASTN svgBLASTP svg
NC_019908:2068631*2068631210767339043Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_014150:26170722617072264049123420Brachyspira murdochii DSM 12563 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_003454:20807052080705210460123897Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete2e-0971.9BLASTN svgBLASTP svg
NC_009850:41309341309343688323791Arcobacter butzleri RM4018, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010674:13904731390473141116620694Clostridium botulinum B str. Eklund 17B, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010723:13792561379256140062221367Clostridium botulinum E3 str. Alaska E43, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013316:89178289178291434722566Clostridium difficile R20291, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_009089:96595996595998833722379Clostridium difficile 630, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_002976:15407941540794156113820345Staphylococcus epidermidis RP62A, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_004347:71809171809175739939309Shewanella oneidensis MR-1, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_010718:1959517*1959517198298623470Natranaerobius thermophilus JW/NM-WN-LF, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_011565:385454*38545440309917646Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,5e-0763.9BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006274:5122500*5122500514359021091Bacillus cereus E33L, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005945:5053000*5053000507465121652Bacillus anthracis str. Sterne, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_000964:64978164978166954019760Bacillus subtilis subsp. subtilis str. 168, complete genome2e-0661.9BLASTN svgBLASTP svg