Pre_GI: BLASTP Hits

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Query: NC_009617:4436837:4452148 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 4452148, End: 4452639, Length: 492

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:3148000:314822731482273149189963Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIB2e-54211
NC_017047:3212000:321229332122933213255963Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB1e-53208
NC_015061:3147691:314769131476913148653963Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit1e-53208
NC_015425:841754:863643863643864116474Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIB4e-53206
NC_012880:2399205:240136324013632402304942Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit1e-52205
NC_013192:2434664:245368324536832454174492Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit6e-44176
NC_013199:392450:411366411366411860495Lactobacillus rhamnosus Lc 705, complete genomePTS system, sorbose IIB component3e-41167
NC_008261:967973:969127969127970107981Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIB component9e-40162
NC_011660:2509362:251816925181692519134966Listeria monocytogenes HCC23 chromosome, complete genomePTS system mannose-specific eiiab component (eiiab-man)8e-39159
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit3e-38157
NC_010723:1379256:139787513978751398852978Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IIB component8e-38155
NC_016612:2902628:292860929286092929085477Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system fructose-specific transporter subunit IIB1e-36152
NC_015214:437733:4748524748524758621011Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IIAB component2e-35147
NC_014724:439594:4752374752374762471011Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IIAB component3e-35147
NC_014106:419511:4506944506944517011008Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIAB component3e-35147
NC_005362:1870620:187806118780611879056996Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific5e-35146
NC_013504:1648551:165705116570511658046996Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific5e-35146
NC_015975:1936504:195217819521781953164987Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, mannose-specific IIAB component5e-35146
NC_018528:1681060:1689111168911116901211011Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannost-specific transporter subunits IIAB5e-35146
NC_015975:1936504:195319519531951953710516Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, IIB component4e-35146
NC_015602:1339067:1346038134603813470451008Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-34145
NC_008530:1775841:178186117818611782859999Lactobacillus gasseri ATCC 33323, complete genomePhosphotransferase system, mannose/fructose-specific component IIA2e-34144
NC_016023:875416:885400885400885882483Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB5e-24110
NC_014498:99015:120148120148120624477Streptococcus pneumoniae 670-6B chromosome, complete genomePTS system sugar-specific transporter subunit EIIB2e-23108
NC_010380:124655:145788145788146264477Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific eiib component2e-23108
NC_015389:1070500:110510911051091105606498Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component2e-21101
NC_015389:1782825:179673517967351797214480Coriobacterium glomerans PW2 chromosome, complete genomeProtein-N(pi)-phosphohistidine--sugarphosphotran sferase1e-2099
NC_020063:4653422:466827946682794668776498Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB4e-2097.1
NC_004337:3249791:327073932707393271248510Shigella flexneri 2a str. 301, complete genomecytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)1e-1995.9
NC_004741:3240909:326185732618573262366510Shigella flexneri 2a str. 2457T, complete genomecytoplasmic transport protein N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA)1e-1995.9
NC_013941:3884725:390905839090583909567510Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePTS system subunit IIB1e-1995.9
NC_017328:3289853:331080233108023311311510Shigella flexneri 2002017 chromosome, complete genomePTS system, cytoplasmic, N-acetylgalactosamine-specific IIB component 21e-1995.9
NC_010473:3354052:337598433759843376457474Escherichia coli str. K-12 substr. DH10B, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS1e-1995.9
AC_000091:3258377:328007232800723280545474Escherichia coli W3110 DNA, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS1e-1995.9
NC_012759:3143455:316538731653873165860474Escherichia coli BW2952 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IIB1e-1995.9
CP002185:3475991:349792134979213498394474Escherichia coli W, complete genomeN-acetylgalactosamine-specific enzyme IIB component of PTS1e-1995.9
NC_012967:3191319:321314532131453213618474Escherichia coli B str. REL606 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IIB1e-1995.9
NC_011294:4604283:462758746275874628048462Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit B3e-1994.4
NC_013171:1808000:182302518230251823498474Anaerococcus prevotii DSM 20548, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase3e-1994.4
NC_012962:869295:882141882141882623483Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iib component 2 (eiib-aga' (n-acetylgalactosamine-permease iib component 2) (phosphotransferas enzyme ii, b5e-1993.6
NC_005126:949226:967712967712968194483Photorhabdus luminescens subsp. laumondii TTO1, complete genomePTS system, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA') (N-acetylgalactosamine-permease IIB component 2) (Phosphotransferase enzyme II,6e-1993.2
NC_014377:1897857:190819819081981908701504Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system sorbose subfamily IIB component1e-1789
NC_010067:1116148:112511011251101125607498Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1787.4
NC_015389:809474:818601818601819104504Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component7e-1786.3
NC_014377:1897857:191102719110271911503477Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system sorbose subfamily IIB component3e-1684.3
NC_011742:3799788:380977838097783810263486Escherichia coli S88 chromosome, complete genomePTS system mannose/fructose-specific transporter subunit IIA4e-1684
NC_008563:3888232:389503038950303895515486Escherichia coli APEC O1, complete genomehypothetical protein4e-1684
NC_007946:3855445:386224338622433862728486Escherichia coli UTI89, complete genomeputative phosphotransferase system protein4e-1684
NC_020409:560278:572726572726573193468Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePTS system sorbose subfamily IIB component5e-1683.6
NC_002937:1706000:171632817163281716789462Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePTS system, IIB component6e-1683.2
NC_009792:4693152:471149447114944711979486Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1581.3
NC_015519:270637:289314289314289790477Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB5e-1580.1
NC_013198:394000:417573417573418049477Lactobacillus rhamnosus GG, complete genomePTS system, IIB component1e-1479
NC_015389:1977736:200771220077122008200489Coriobacterium glomerans PW2 chromosome, complete genomePTS system sorbose subfamily IIB component2e-1478.6
NC_005139:518760:525878525878526366489Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB2e-1478.6
NC_003198:3855157:387690538769053877390486Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein3e-1477.8
NC_011149:3895921:389592138959213896406486Salmonella enterica subsp. enterica serovar Agona str. SL483,PTS system sorbose subfamily IIB component3e-1477.8
NC_011083:3985618:398561839856183986103486Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,PTS system sorbose subfamily IIB component3e-1477.8
NC_006511:3759550:375955037595503760035486Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system protein3e-1477.8
NC_004631:3841975:386239538623953862880486Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein3e-1477.8
NC_009442:1158268:116603411660341166525492Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB3e-1477.4
NC_017046:3991551:399155139915513992075525Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter protein4e-1477.4
NC_009089:581655:582091582091582564474Clostridium difficile 630, complete genomePTS system, IIb component6e-1476.6
NC_014844:1634985:165960816596081660072465Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePTS system sorbose subfamily IIB component2e-1375.1
NC_011134:1222739:122619612261961226687492Streptococcus equi subsp. zooepidemicus str. MGCS10565, completePTS system mannose/fructose family IIB component2e-1168.6
NC_012470:853561:883776883776884267492Streptococcus equi subsp. zooepidemicus, complete genomesugar phosphotransferase system (PTS), mannose/fructose family, IIB component2e-1168.6
NC_014334:2696000:270562927056292706099471Lactobacillus casei str. Zhang chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB3e-1167.8
NC_016023:1769925:178681217868121787303492Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB1e-1065.9
NC_014758:1489761:149108514910851491573489Calditerrivibrio nitroreducens DSM 19672 chromosome, completepts system sorbose subfamily iib component6e-0857
NC_015968:3053565:306397530639753064280306Enterobacter asburiae LF7a chromosome, complete genomePTS system sorbose subfamily transporter subunit IIB7e-0856.6
NC_015424:2357600:237784523778452378249405Aeromonas veronii B565 chromosome, complete genomefructose-specific phosphotransferase enzyme iib component2e-0652