Pre_GI: BLASTP Hits

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Query: NC_009617:3360990:3374454 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 3374454, End: 3375317, Length: 864

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020291:2218425:222884522288452229696852Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid ABC transporter substrate-binding protein, PAAT family4e-76285
NC_014098:2971011:297631029763102977149840Bacillus tusciae DSM 2912 chromosome, complete genomeextracellular solute-binding protein family 35e-43174
NC_016051:1471782:148883514888351489596762Thermococcus sp. AM4 chromosome, complete genomeglutamine ABC transporter periplasmic glutamine-binding protein6e-1478.2
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein1e-1377.4
NC_004129:2609189:263173026317302632518789Pseudomonas fluorescens Pf-5, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-1377.4
NC_015320:743983:761388761388762212825Archaeoglobus veneficus SNP6 chromosome, complete genomeABC transporter periplasmic subunit family 31e-1377
NC_009328:2378345:239928923992892400155867Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter3e-1375.9
NC_015913:178451:194768194768195571804Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeamino acid ABC transporter, amino acid-binding protein9e-1374.3
NC_015555:693461:693461693461694237777Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, periplasmic subunit family 39e-1374.3
NC_013960:2761353:277059627705962771510915Nitrosococcus halophilus Nc4 chromosome, complete genomeectoine/hydroxyectoine ABC transporter solute-binding protein1e-1273.9
NC_016012:135500:151841151841152644804Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeamino acid ABC transporter ATP-binding protein3e-1272.8
NC_012881:3004784:303306830330683033856789Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 34e-1272.4
NC_014410:2149886:217043421704342171210777Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 31e-1170.9
NC_005773:2641715:264389426438942644766873Pseudomonas syringae pv. phaseolicola 1448A, complete genomeABC transporter binding protein-like protein AabH3e-1168.9
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein9e-1167.8
NC_008261:2614817:2614817261481726163251509Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family1e-1067.4
NC_008577:1015419:102816310281631028897735Shewanella sp. ANA-3 chromosome 1, complete sequenceextracellular solute-binding protein, family 32e-1067
NC_002947:4994335:502307950230795023933855Pseudomonas putida KT2440, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein2e-1066.6
NC_015385:456000:478397478397479167771Treponema succinifaciens DSM 2489 chromosome, complete genomeABC-type transporter, periplasmic subunit family 34e-1065.9
NC_017986:331610:333286333286334143858Pseudomonas putida ND6 chromosome, complete genomeABC transporter periplasmic protein3e-1065.9
NC_006142:140853:180473180473181198726Rickettsia typhi str. Wilmington, complete genomeglutamine-binding periplasmic protein GlnH3e-1065.9
NC_017062:141270:180890180890181615726Rickettsia typhi str. B9991CWPP chromosome, complete genomeglutamine-binding periplasmic protein GlnH3e-1065.9
NC_017066:140853:180473180473181198726Rickettsia typhi str. TH1527 chromosome, complete genomeglutamine-binding periplasmic protein GlnH3e-1065.9
NC_014654:592582:605498605498606232735Halanaerobium sp. 'sapolanicus' chromosome, complete genomeextracellular solute-binding protein family 38e-1064.7
NC_008786:1767315:178684417868441787620777Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 38e-1064.7
NC_012912:4737703:475823547582354759071837Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 31e-0963.9
NC_010551:415487:429248429248430048801Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceextracellular solute-binding protein family 31e-0963.9
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit1e-0963.9
NC_020064:1611820:163286516328651633599735Serratia marcescens FGI94, complete genomeL-arginine-binding protein5e-0961.6
NC_004193:375416:590982590982591848867Oceanobacillus iheyensis HTE831, complete genomeABC transporter6e-0961.6
NC_005957:3975192:397767239776723978451780Bacillus thuringiensis serovar konkukian str. 97-27, completeamino acid ABC transporter, amino acid-binding protein9e-0961.2
NC_010508:451184:465275465275466075801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceextracellular solute-binding protein family 39e-0961.2
NC_008600:3976045:397745639774563978235780Bacillus thuringiensis str. Al Hakam, complete genomeamino acid ABC transporter, amino acid-binding protein9e-0961.2
NC_011773:3982008:398341939834193984198780Bacillus cereus AH820 chromosome, complete genomeamino acid ABC transporter amino acid-binding protein9e-0961.2
NC_014377:1546124:154975815497581550594837Thermosediminibacter oceani DSM 16646 chromosome, complete genomeextracellular solute-binding protein family 37e-0961.2
NC_008542:483761:504205504205505005801Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceextracellular solute-binding protein, family 39e-0960.8
NC_008060:2913671:292018429201842920984801Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceextracellular solute-binding protein, family 39e-0960.8
NC_011992:717107:744459744459745259801Acidovorax ebreus TPSY, complete genomeextracellular solute-binding protein family 31e-0860.8
NC_011969:3879412:388082338808233881602780Bacillus cereus Q1 chromosome, complete genomeamino acid ABC transporter substrate-binding protein1e-0860.5
NC_007510:409843:409843409843410643801Burkholderia sp. 383 chromosome 1, complete sequenceABC amino acid transporter, periplasmic ligand binding protein1e-0860.5
NC_013202:1620753:162075316207531621529777Halomicrobium mukohataei DSM 12286, complete genomeextracellular solute-binding protein family 32e-0860.1
NC_012491:5628000:563079556307955631598804Brevibacillus brevis NBRC 100599, complete genomeprobable amino acid ABC transporter substrate binding protein2e-0859.7
NC_007494:867901:867901867901868692792Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceABC amino acid transporter, periplasmic binding protein2e-0859.7
NC_008786:3845988:384832538483253849149825Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 33e-0859.3
NC_015578:3371171:337494833749483375775828Treponema primitia ZAS-2 chromosome, complete genomeextracellular solute-binding protein, family 34e-0858.9
NC_017218:1166844:118298111829811183829849Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeABC transporter substrate-binding protein4e-0858.9
NC_009256:458649:480091480091480891801Burkholderia vietnamiensis G4 chromosome 1, complete sequenceextracellular solute-binding protein3e-0858.9
NC_010184:4021688:402238440223844023163780Bacillus weihenstephanensis KBAB4, complete genomeextracellular solute-binding protein family 37e-0858.2
NC_014222:1188719:120948412094841210269786Methanococcus voltae A3 chromosome, complete genomeextracellular solute-binding protein family 31e-0757.8
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain1e-0757.4
NC_017986:2985514:300434230043423005094753Pseudomonas putida ND6 chromosome, complete genomeextracellular solute-binding protein2e-0757
NC_020063:2785652:280459928045992805426828Enterobacteriaceae bacterium strain FGI 57, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family1e-0757
NC_003296:556836:602236602236603003768Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN2e-0756.6
NC_015224:3225000:324117632411763241958783Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,histidine-binding periplasmic protein2e-0756.6
NC_008800:1459015:146456114645611465343783Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,histidine-binding periplasmic protein2e-0756.6
NC_014727:889132:904535904535905395861Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,amino acid ABC transporter substrate-binding protein2e-0756.6
NC_014150:2088012:211820221182022118945744Brachyspira murdochii DSM 12563 chromosome, complete genomeextracellular solute-binding protein family 32e-0756.6
NC_015500:900807:929530929530930366837Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, periplasmic subunit family 32e-0756.6
NC_008541:1931266:195269519526951953588894Arthrobacter sp. FB24 chromosome 1, complete sequenceextracellular solute-binding protein2e-0756.2
NC_009832:2596344:261880026188002619573774Serratia proteamaculans 568, complete genomeextracellular solute-binding protein family 33e-0756.2
NC_008011:924392:939981939981940730750Lawsonia intracellularis PHE/MN1-00, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain4e-0755.8
NC_012121:1444633:1449993144999314514681476Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein4e-0755.8
NC_009617:1255762:125735412573541258187834Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular solute-binding protein3e-0755.8
NC_011884:3302500:332206433220643322978915Cyanothece sp. PCC 7425, complete genomeextracellular solute-binding protein family 34e-0755.5
NC_008529:197272:209319209319210179861Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeABC-type amino acid transport system, periplasmic component/domain5e-0755.1
NC_007512:944941:9784109784109813822973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine6e-0755.1
NC_007963:3113739:312316631231663123933768Chromohalobacter salexigens DSM 3043, complete genomeextracellular solute-binding protein, family 38e-0754.7
NC_007907:2995889:300037030003703001215846Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0754.7
NC_011830:4031901:403190140319014032746846Desulfitobacterium hafniense DCB-2, complete genomeextracellular solute-binding protein family 37e-0754.7
NC_007512:1162949:1184174118417411871462973Pelodictyon luteolum DSM 273, complete genomeAmino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine7e-0754.7
NC_008800:2695977:271113927111392711939801Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cystine transporter subunit9e-0754.3
NC_008054:201075:217468217468218328861Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeAmino acid ABC transporter, substrate binding protein1e-0654.3
NC_015675:6464000:647369964736996474535837Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 3 extracellular solute-binding protein1e-0653.9
NC_014923:5909000:591902859190285919864837Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeextracellular solute-binding protein family 31e-0653.9
NC_019973:5838000:584798858479885848824837Mesorhizobium australicum WSM2073, complete genomeperiplasmic component of amino acid ABC-type transporter/signal transduction system1e-0653.9
NC_011894:957897:969653969653970456804Methylobacterium nodulans ORS 2060, complete genomeextracellular solute-binding protein family 31e-0653.9
NC_016514:2950860:295757829575782958378801Enterobacter cloacae EcWSU1 chromosome, complete genomecystine-binding periplasmic protein1e-0653.9
NC_006177:520055:531674531674532501828Symbiobacterium thermophilum IAM 14863, complete genomeamino acid ABC transporter substrate-binding protein2e-0653.5
NC_003366:728859:750652750652751488837Clostridium perfringens str. 13, complete genomeprobable amino acid ABC transporter2e-0653.5
NC_008262:654000:676152676152676988837Clostridium perfringens SM101, complete genomeamino acid ABC transporter2e-0653.5
NC_016816:1912366:194686119468611947661801Pantoea ananatis LMG 5342, complete genomeABC transporter substrate-binding protein2e-0653.5
NC_004578:6089958:609074660907466091510765Pseudomonas syringae pv. tomato str. DC3000, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-0653.5
NC_010501:5442000:544314554431455443897753Pseudomonas putida W619, complete genomeextracellular solute-binding protein family 32e-0653.1
NC_010520:1586000:160081116008111601629819Clostridium botulinum A3 str. Loch Maree, complete genomeamino acid ABC transporter, amino acid-binding protein2e-0653.1
NC_012779:3570720:358333135833313583969639Edwardsiella ictaluri 93-146, complete genomebacterial extracellular solute-binding protein, family 32e-0653.1
NC_007604:41495:750917509175852762Synechococcus elongatus PCC 7942, complete genomeextracellular solute-binding protein, family 32e-0653.1
NC_008261:676000:697962697962698798837Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein3e-0652.8
NC_008027:5533311:553409655340965534857762Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein3e-0652.8
NC_009436:2685910:270448927044892705289801Enterobacter sp. 638, complete genomecystine transporter subunit3e-0652.8
NC_012691:1743038:174678317467831747562780Tolumonas auensis DSM 9187, complete genomecationic amino acid ABC transporter, periplasmic binding protein3e-0652.4
NC_015978:1266196:128338612833861284177792Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeABC transporter glutamine-binding protein glnH3e-0652.4
NC_007712:1791766:181582618158261816557732Sodalis glossinidius str. 'morsitans', complete genomearginine ABC transporter periplasmic component3e-0652.4
NC_014837:2803447:280880128088012809598798Pantoea sp. At-9b chromosome, complete genomecationic amino acid ABC transporter periplasmic-binding protein4e-0652
NC_014910:1050706:106191710619171062750834Alicycliphilus denitrificans BC chromosome, complete genomeextracellular solute-binding protein family 35e-0652
NC_016629:4081500:410174641017464102567822Desulfovibrio africanus str. Walvis Bay chromosome, completeABC transporter substrate-binding protein7e-0651.6
NC_002163:687925:687925687925688680756Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehistidine-binding protein precursor7e-0651.6
NC_006396:320853:336442336442337230789Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceglutamine ABC transporter permease protein8e-0651.2
NC_015389:2030154:205005520500552050903849Coriobacterium glomerans PW2 chromosome, complete genomeamino acid ABC transporter substrate-binding protein, PAAT family8e-0651.2
NC_014165:374674:375504375504376352849Thermobispora bispora DSM 43833 chromosome, complete genomeextracellular solute-binding protein family 39e-0651.2
NC_013861:1498212:150137415013741502093720Legionella longbeachae NSW150, complete genomearginine 3rd transport system periplasmic binding protein9e-0651.2