Pre_GI: BLASTP Hits

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Query: NC_009617:1897887:1913872 Clostridium beijerinckii NCIMB 8052 chromosome, complete genome

Start: 1913872, End: 1915104, Length: 1233

Host Lineage: Clostridium beijerinckii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. There are also species that can fix molecular nitrogen and thus are important participants in biological turnaround of nitrogen compounds in nature. This species is used to produce industrial solvents.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:2587000:2603244260324426045091266Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-120432
NC_009633:2592000:2615672261567226169461275Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-117422
NC_002737:533291:5450875450875462531167Streptococcus pyogenes M1 GAS, complete genomeconserved hypothetical protein, phage associated4e-109395
NC_014393:4775452:4810611481061148118671257Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-104380
NC_014632:1112733:1138770113877011400261257Ilyobacter polytropus DSM 2926 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-103374
NC_010337:2848360:2893873289387328951051233Heliobacterium modesticaldum Ice1, complete genomeDNA methylase1e-98360
NC_014393:937000:9529689529689542211254Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-95348
NC_014328:303063:3623603623603636041245Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative methylase9e-94344
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-61e-93343
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein2e-92339
NC_009706:2673906:2721831272183127230721242Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase6e-92338
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein2e-90333
NC_010163:614634:629457629457630335879Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA modification methylase3e-90332
NC_016625:1259778:1260363126036312616371275Burkholderia sp. YI23 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein2e-89330
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase3e-89329
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-89327
NC_012471:141463:1552281552281563941167Streptococcus equi subsp. equi 4047, complete genomephage DNA methylase1e-88327
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease9e-87320
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase2e-86319
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-86318
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein7e-86317
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase7e-86317
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease7e-86317
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase1e-85317
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase4e-85315
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein4e-85315
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-84313
NC_004557:2037500:2054930205493020560031074Clostridium tetani E88, complete genomechromosome partitioning parB family protein9e-84310
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase8e-83307
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase3e-82306
NC_008530:1454118:1470694147069414719201227Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain and DNA modification methylase domain1e-81303
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-81303
NC_010981:1371265:1388212138821213894441233Wolbachia pipientis, complete genomePhage related DNA methylase1e-80300
NC_010981:242500:2620412620412632731233Wolbachia pipientis, complete genomePhage related DNA methylase1e-80300
NC_010981:314745:3355613355613367931233Wolbachia pipientis, complete genomePhage related DNA methylase1e-80300
NC_012416:573202:5984745984745997001227Wolbachia sp. wRi, complete genomeDNA methylase4e-80298
NC_012416:1079661:1104933110493311061591227Wolbachia sp. wRi, complete genomeDNA methylase4e-80298
NC_002978:549454:5722595722595734851227Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW4, DNA methylase7e-80298
NC_013722:2848366:2849628284962828509261299Xanthomonas albilineans, complete genomeputative adn methyltransferase protein4e-79295
NC_020207:1170000:1176467117646711776661200Enterococcus faecium NRRL B-2354, complete genomeDNA methylase7e-78291
NC_002978:234082:2486082486082498371230Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, DNA methylase4e-76285
NC_014365:2888897:2887701288770128889001200Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease2e-68259
NC_012491:3736167:3742439374243937437371299Brevibacillus brevis NBRC 100599, complete genomehypothetical protein4e-67255
NC_014365:2843126:2846724284672428479111188Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease1e-65250
NC_011420:36272:4879748797500351239Rhodospirillum centenum SW, complete genomeDNA methylase, putative5e-64245
NC_016026:1969766:1978706197870619800371332Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA methylase family protein2e-55216
NC_012988:769981:8472298472298487131485Methylobacterium extorquens DM4, complete genomephage methyltransferase3e-50199
NC_010172:798923:8671778671778686431467Methylobacterium extorquens PA1, complete genomeDNA methylase N-4/N-6 domain protein4e-50199
NC_008751:1043269:1077549107754910796032055Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeParB domain protein nuclease9e-50197
NC_008358:2638245:2697509269750926988611353Hyphomonas neptunium ATCC 15444, complete genomeDNA methylase1e-47191
NC_017082:532000:5490945490945503591266Bradyrhizobium sp. S23321, complete genomehypothetical protein5e-47188
NC_011420:36272:4740747407487921386Rhodospirillum centenum SW, complete genomeDNA methylase, putative2e-43177
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein2e-43176
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-41170
NC_009511:1746631:1754713175471317561641452Sphingomonas wittichii RW1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-40166
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase9e-37154
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-36152
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-64e-36152
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase8e-36151
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein1e-35150
NC_011386:931140:9565829565829579871406Oligotropha carboxidovorans OM5, complete genome4e-35149
NC_010644:1039576:1058326105832610595161191Elusimicrobium minutum Pei191, complete genomenuclease4e-35149
NC_011958:976500:100417210041721005065894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-63e-34146
NC_003485:1450045:147796114779611478479519Streptococcus pyogenes MGAS8232, complete genomehypothetical protein4e-33142
NC_003296:673790:710925710925711593669Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein5e-32139
NC_007296:1230614:125515812551581255676519Streptococcus pyogenes MGAS6180, complete genomeParB-like protein3e-32139
NC_004606:623853:638522638522639040519Streptococcus pyogenes SSI-1, complete genomehypothetical protein3e-32139
NC_014217:3024961:303590830359083036861954Starkeya novella DSM 506 chromosome, complete genomehypothetical protein3e-32139
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase4e-30132
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-30132
NC_011958:976500:1005431100543110068071377Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA modification methylase3e-29129
NC_013171:896802:910865910865911455591Anaerococcus prevotii DSM 20548, complete genomeParB domain protein nuclease2e-27123
NC_014310:1822751:186556618655661866315750Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein4e-26119
NC_015558:1813500:1821200182120018223001101Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein1e-24114
NC_014034:1036652:103761910376191038395777Rhodobacter capsulatus SB1003 chromosome, complete genomeParB domain-containing protein nuclease2e-21103
NC_014311:2606434:262127426212742621693420Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein4e-2099.8
NC_010084:2484000:2487717248771724889281212Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein4e-2099.4
NC_010804:996837:1035845103584510370501206Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-1894.7
NC_008530:646207:653763653763654047285Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain4e-1892.8
NC_009708:2537557:254313325431332543642510Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeParB family protein4e-1892.8
NC_014922:825396:8510208510208523751356Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein4e-1789.4
NC_010163:614634:629164629164629439276Acholeplasma laidlawii PG-8A chromosome, complete genomeParB-like nuclease domain-containing protein6e-1789
CP002516:2580774:258429925842992585087789Escherichia coli KO11, complete genomeParB domain protein nuclease1e-1585.1
NC_016902:2580774:258429925842992585087789Escherichia coli KO11FL chromosome, complete genomeParB domain-containing protein nuclease1e-1585.1
NC_008563:1475500:148710414871041487895792Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-1584
NC_015519:2489728:249187024918702492383514Tepidanaerobacter sp. Re1 chromosome, complete genome3e-1480.1
NC_003296:673790:711726711726711974249Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-1377.8
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase4e-1272.8
NC_011958:976500:100507210050721005434363Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-61e-1068.2
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-1067.8
NC_020387:796253:816956816956817669714Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase2e-1067.8
NC_014150:2201251:223851922385192239298780Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-1067.4
NC_011365:1103927:110848411084841109161678Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1067.4
NC_010125:381711:393090393090393770681Gluconacetobacter diazotrophicus PAl 5, complete genomeputative modification methylase3e-1066.6
NC_018607:2747462:276222627622262763002777Brachyspira pilosicoli B2904 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1066.6
NC_014639:3520874:3530675353067535317571083Bacillus atrophaeus 1942 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-1065.5
CP002207:3520874:3530675353067535317571083Bacillus atrophaeus 1942, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-1065.5
NC_016945:370471:400214400214400867654Vibrio cholerae IEC224 chromosome II, complete sequencehemagglutinin associated protein7e-1065.5
NC_018604:2871328:288627128862712887047777Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0964.7
NC_016446:49618:100895100895101587693Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehemagglutinin associated protein2e-0964.3
NC_012667:931390:985200985200985892693Vibrio cholerae MJ-1236 chromosome 2, complete genomehemagglutinin associated protein2e-0964.3
NC_012583:361241:411642411642412334693Vibrio cholerae O395 chromosome chromosome II, complete sequenceDNA methylase N-4/N-62e-0964.3
NC_012580:353273:376048376048376740693Vibrio cholerae M66-2 chromosome II, complete sequenceDNA methylase N-4/N-62e-0964.3
NC_009456:787322:851608851608852300693Vibrio cholerae O395 chromosome 1, complete sequencehemagglutinin associated protein2e-0964.3
NC_002506:370629:400356400356401048693Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehaemagglutinin associated protein2e-0964.3
NC_017045:1:132401324014139900Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase n-4/n-6 domain protein2e-0963.5
NC_014330:1324500:133930513393051340087783Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0963.5
NC_010546:1853825:185626218562621857116855Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprobable DNA-methyltransferase3e-0963.5
NC_012796:4075583:408655940865594087224666Desulfovibrio magneticus RS-1, complete genomehypothetical protein8e-0962
NC_011365:1171536:120245612024561203127672Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0861.6
NC_004603:370320:392721392721393386666Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehaemagglutinin associated protein1e-0861.6
NC_008686:95326:110943110943111620678Paracoccus denitrificans PD1222 chromosome 1, complete sequenceDNA methylase N-4/N-6 domain protein1e-0861.2
NC_015063:1:166811668117325645Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceDNA methylase N-4/N-6 domain protein3e-0860.1
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase7e-0858.9
NC_015500:78223:9353393533947321200Treponema brennaborense DSM 12168 chromosome, complete genomeDNA methylase N-4/N-6 domain protein8e-0858.5
NC_018528:697553:704315704315704764450Lactobacillus helveticus R0052 chromosome, complete genomeModification methylase CfrBI1e-0758.2
NC_010546:4590994:460997546099754610862888Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative DNA methylase N-4/N-61e-0758.2
NC_004851:157675:164527164527165210684Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein1e-0758.2
NC_017319:155958:163189163189163872684Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein1e-0758.2
NC_002128:35000:393633936340046684Escherichia coli O157:H7 str. Sakai plasmid pO157, completehemagglutinin-associated protein1e-0758.2
NC_007414:56508:619386193862621684Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein1e-0758.2
NC_017082:532000:551466551466552002537Bradyrhizobium sp. S23321, complete genomehypothetical protein1e-0757.8
NC_004369:1552847:1558925155892515600371113Corynebacterium efficiens YS-314, complete genomehypothetical protein2e-0757.8
NC_006856:95830:960529605296735684Salmonella enterica subsp. enterica serovar Choleraesuis strputative site-specific DNA methyl transferase2e-0757.4
NC_008024:548165:561046561046561834789Streptococcus pyogenes MGAS10750, complete genomeAdenine-specific methyltransferase2e-0757
NC_003485:579946:590462590462591250789Streptococcus pyogenes MGAS8232, complete genomehypothetical protein2e-0757
NC_012658:1405788:140578814057881406594807Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA methylase2e-0757
NC_009787:17344:180141801418697684Escherichia coli E24377A plasmid pETEC_35, complete sequenceDNA methylase family protein3e-0756.6
NC_013170:311045:3330583330583342901233Cryptobacterium curtum DSM 15641, complete genomeParB-like nuclease4e-0756.6
NC_009332:653474:663753663753664517765Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA methylase4e-0756.2
NC_003485:1228149:123171712317171232472756Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-0756.2
NC_003910:486776:504750504750505442693Colwellia psychrerythraea 34H, complete genomehaemagglutinin associated protein5e-0755.8
NC_018604:758819:762103762103763008906Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein6e-0755.8
NC_012590:2117027:214046021404602141245786Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein1e-0655.1
AC_000091:1407693:142709114270911427354264Escherichia coli W3110 DNA, complete genomehypothetical protein9e-0755.1
NC_010473:1493983:151279715127971513060264Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; conserved protein9e-0755.1
NC_000913:1404000:142340114234011423664264Escherichia coli K12, complete genomeRac prophage; conserved protein9e-0755.1
NC_012759:1296000:131546013154601315723264Escherichia coli BW2952 chromosome, complete genomeRac prophage protein9e-0755.1
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0654.7
NC_012526:300126:3174953174953185081014Deinococcus deserti VCD115, complete genomeputative DNA methylase2e-0653.9
NC_011831:4043802:4052982405298240540251044Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein2e-0653.9
NC_007146:1405459:141839814183981419135738Haemophilus influenzae 86-028NP, complete genomemodification methylase DpnIIB-like2e-0653.9
NC_012590:2117027:213352421335242134039516Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein2e-0653.9
NC_009567:904922:914526914526915257732Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein2e-0653.9
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase3e-0653.5
NC_014922:825396:839238839238839975738Haemophilus influenzae F3047 chromosome, complete genomeDNA methylase2e-0653.5
NC_014363:2035141:8828821709828Olsenella uli DSM 7084 chromosome, complete genomeparB-like partition protein5e-0652.8
NC_010067:4149298:416498041649804165864885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0652.4
NC_009615:3904962:393457839345783935525948Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA-methyltransferase8e-0652
NC_010158:92819:108442108442109119678Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceDNA methylase9e-0652
NC_004838:51013:666486664867325678Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein9e-0651.6
NC_008118:56777:947909479095467678Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA methylase9e-0651.6
NC_003134:64672:646726467265349678Yersinia pestis CO92 plasmid pMT1, complete sequenceputative DNA methylase9e-0651.6
NC_009378:106193:130882130882131559678Yersinia pestis Pestoides F plasmid MT, complete sequenceputative methylase9e-0651.6
NC_005815:61148:893978939790074678Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative methylase9e-0651.6