Pre_GI: BLASTP Hits

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Query: NC_009614:3385187:3388991 Bacteroides vulgatus ATCC 8482 chromosome, complete genome

Start: 3388991, End: 3389491, Length: 501

Host Lineage: Bacteroides vulgatus; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Normal gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides vulgatus and Bacteroides thetaiotaomicron are the the most common fecal isolates from humans and other animals. Comparison of Bacteroides vulgatus with other Bacteroides species will provide information on their ability to colonize and exploit the intestinal environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006347:3166000:318858631885863189104519Bacteroides fragilis YCH46, complete genomeputative transcriptional regulator UpxY homolog5e-74276
NC_003228:3212500:324997932499793250497519Bacteroides fragilis NCTC 9343, complete genomeputative transcriptional regulator (pseudogene)5e-74276
NC_015160:3585354:360347936034793604009531Odoribacter splanchnicus DSM 20712 chromosome, complete genomeNGN domain-containing protein3e-39160
NC_019904:5241444:527977352797735280276504Echinicola vietnamensis DSM 17526 chromosome, complete genometranscription antiterminator1e-1892
NC_014759:2598515:261424026142402614764525Marivirga tractuosa DSM 4126 chromosome, complete genomenusg antitermination factor2e-1375.5
NC_008639:2968000:297221029722102972752543Chlorobium phaeobacteroides DSM 266, complete genomeNusG antitermination factor1e-1375.5
NC_014032:825793:926006926006926695690Salinibacter ruber M8 chromosome, complete genometranscription antitermination protein nusG3e-1374.3
NC_007677:771168:829009829009829698690Salinibacter ruber DSM 13855, complete genomeputative transcriptional regulator3e-1374.3
NC_014041:558000:563449563449563943495Zunongwangia profunda SM-A87 chromosome, complete genomeNusG antitermination factor4e-1270.9
NC_016609:8271000:827128182712818271790510Niastella koreensis GR20-10 chromosome, complete genomeNusG antitermination factor2e-0962
NC_013730:3208571:322110832211083221593486Spirosoma linguale DSM 74, complete genomeNusG antitermination factor1e-0962
NC_014355:2635500:265714026571402657703564Candidatus Nitrospira defluvii, complete genomeputative transcription termination/antitermination factor NusG2e-0961.6
NC_008700:2701500:273069327306932731196504Shewanella amazonensis SB2B, complete genometranscriptional activator rfaH, putative4e-0754.3
NC_011663:1709003:171310317131031713609507Shewanella baltica OS223 chromosome, complete genometranscriptional acivator RfaH8e-0753.1
NC_009665:3460906:348608834860883486594507Shewanella baltica OS185 chromosome, complete genometranscriptional acivator RfaH8e-0753.1
NC_009052:3381943:340800234080023408508507Shewanella baltica OS155, complete genomeNusG antitermination factor1e-0652.4
NC_008577:1579950:158776915877691588269501Shewanella sp. ANA-3 chromosome 1, complete sequenceNusG antitermination factor2e-0652
NC_008322:1595500:159756415975641598064501Shewanella sp. MR-7, complete genomeNusG antitermination factor2e-0652
NC_011295:847903:855471855471856019549Coprothermobacter proteolyticus DSM 5265, complete genometranscription antitermination factor5e-0650.4