Pre_GI: BLASTN Hits

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Query: NC_009567:904922 Haemophilus influenzae PittGG chromosome, complete genome

Start: 904922, End: 931599, Length: 26678

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: Strain PittGG is a non-typeable Haemophilus influenzae (NTHi) isolate recovered by Dr. Robert Wadowsky from the external ear discharge of a spontaneously perforated tympanic membrane of a child in Pittsburgh, USA who had been diagnosed with otorrhea. Causes respiratory tract infections primarily in children. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015942:63440*634408731823879Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015942:1711026*1711026173659925574Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015138:2025000*2025000204785422855Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete9e-1383.8BLASTN svgBLASTP svg
NC_008752:20565472056547207678720241Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009053:2025782*2025782204904723266Actinobacillus pleuropneumoniae L20, complete genome3e-34155BLASTN svgBLASTP svg
NC_010939:2085000*2085000210600621007Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete1e-33153BLASTN svgBLASTP svg
NC_010939:32149232149234388122390Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete5e-1177.8BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-33151BLASTN svgBLASTP svg
NC_013416:1091432*1091432110961418183Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-33151BLASTN svgBLASTP svg
NC_013416:15883691588369161218823820Aggregatibacter actinomycetemcomitans D11S-1, complete genome1e-27133BLASTN svgBLASTP svg
NC_014910:1708045*1708045173462726583Alicycliphilus denitrificans BC chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_018704:347948*34794837014822201Amphibacillus xylanus NBRC 15112, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018704:81733*8173311606034328Amphibacillus xylanus NBRC 15112, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014551:483773*48377350659922827Bacillus amyloliquefaciens DSM 7, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009725:496443*49644354991253470Bacillus amyloliquefaciens FZB42, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,8e-0763.9BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete8e-0763.9BLASTN svgBLASTP svg
NC_007530:5197854*5197854521982221969Bacillus anthracis str. 'Ames Ancestor', complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012472:5239944*5239944525821718274Bacillus cereus 03BB102, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_006274:5267585*5267585529331825734Bacillus cereus E33L, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006582:4256915*4256915428739230478Bacillus clausii KSM-K16, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006270:4149004*4149004418759938596Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006322:567987*56798759617928193Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006322:4149500*4149500418760938110Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006270:568171*56817159638928219Bacillus licheniformis ATCC 14580, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014219:83888*8388810707623189Bacillus selenitireducens MLS10 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014976:2735423*2735423276136725945Bacillus subtilis BSn5 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014479:509919*50991953986229944Bacillus subtilis subsp. spizizenii str. W23 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_016047:637778*63777866096423187Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_000964:521975*52197556193339959Bacillus subtilis subsp. subtilis str. 168, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019896:3491000*3491000352473533736Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_020244:516993*51699355115334161Bacillus subtilis XF-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005957:5203915*5203915522509921185Bacillus thuringiensis serovar konkukian str. 97-27, complete8e-0763.9BLASTN svgBLASTP svg
NC_002927:43927684392768441559922832Bordetella bronchiseptica RB50, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007292:623765*62376565772633962Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_016024:156000*15600017748221483Candidatus Chloracidobacterium thermophilum B chromosome chromosome5e-1177.8BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015856:30597373059737308304923313Collimonas fungivorans Ter331 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012526:1576775*1576775160272925955Deinococcus deserti VCD115, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014958:1268559*1268559129322524667Deinococcus maricopensis DSM 21211 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015563:3786192*3786192382040734216Delftia sp. Cs1-4 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome2e-19105BLASTN svgBLASTP svg
NC_013961:1246454*1246454127639829945Erwinia amylovora, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012214:2673058*2673058270161428557Erwinia pyrifoliae Ep1/96, complete genome4e-18101BLASTN svgBLASTP svg
NC_010694:2565580*2565580259415428575Erwinia tasmaniensis, complete genome2e-19105BLASTN svgBLASTP svg
NC_014394:2765261*2765261278592820668Gallionella capsiferriformans ES-2 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007146:14054591405459143009924641Haemophilus influenzae 86-028NP, complete genome05868BLASTN svgBLASTP svg
NC_014830:3275474*3275474329809922626Intrasporangium calvum DSM 43043 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome4e-18101BLASTN svgBLASTP svg
NC_015214:437733*43773348259944867Lactobacillus acidophilus 30SC chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006814:403723*40372344563241910Lactobacillus acidophilus NCFM, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014724:439594*43959448564446051Lactobacillus amylovorus GRL 1112 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010080:445398*44539846977024373Lactobacillus helveticus DPC 4571, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018528:446610*44661047359926990Lactobacillus helveticus R0052 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015602:117939*11793915324635308Lactobacillus kefiranofaciens ZW3 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_016011:59070*590708009921030Listeria ivanovii subsp. ivanovii PAM 55, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002973:72328*723289511822791Listeria monocytogenes str. 4b F2365, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014246:496976*49697651846521490Mobiluncus curtisii ATCC 43063 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014210:4122514*4122514414859926086Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-0763.9BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004193:241480*24148026554624067Oceanobacillus iheyensis HTE831, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014363:8228*82283606827841Olsenella uli DSM 7084 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_012962:49420004942000496422122222Photorhabdus asymbiotica, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011770:4763506*4763506478993126426Pseudomonas aeruginosa LESB58, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004129:5481629*5481629550572324095Pseudomonas fluorescens Pf-5, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007973:2888824*2888824291938730564Ralstonia metallidurans CH34 chromosome 1, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_012856:10800001080000110535625357Ralstonia pickettii 12D chromosome 1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-18101BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str6e-1797.6BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-18101BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,4e-18101BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-18101BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome4e-18101BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014931:2929695*2929695295251022816Variovorax paradoxus EPS chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_012791:2832001*2832001286519533195Variovorax paradoxus S110 chromosome 1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_011184:2723000*2723000274162818629Vibrio fischeri MJ11 chromosome I, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_013457:979102*97910299831619215Vibrio sp. Ex25 chromosome 2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_003919:1203405*1203405123359930195Xanthomonas axonopodis pv. citri str. 306, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003902:3544743*3544743356478520043Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-1695.6BLASTN svgBLASTP svg
NC_002488:1775629*1775629180340827780Xylella fastidiosa 9a5c, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004556:1132354*1132354115105618703Xylella fastidiosa Temecula1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015224:2061951*2061951208443822488Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_010159:2128157*2128157214655218396Yersinia pestis Angola, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008150:1384102*1384102140260518504Yersinia pestis Antiqua, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_005810:1663672*1663672168742323752Yersinia pestis biovar Microtus str. 91001, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003143:2101902*2101902212009918198Yersinia pestis CO92, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004088:2691565*2691565271495023386Yersinia pestis KIM, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006155:2084669*2084669210379619128Yersinia pseudotuberculosis IP 32953, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome3e-1281.8BLASTN svgBLASTP svg